[413088]: / man / vrViolinPlot.Rd

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% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/visualization.R
\name{vrViolinPlot}
\alias{vrViolinPlot}
\title{vrViolinPlot}
\usage{
vrViolinPlot(
object,
features = NULL,
assay = NULL,
group.by = "Sample",
norm = TRUE,
pt.size = 0.5,
plot.points = TRUE,
ncol = 2,
nrow = NULL
)
}
\arguments{
\item{object}{a VoltRon object}
\item{features}{a set of features to be visualized, either from \link{vrFeatures} of raw or normalized data or columns of the \link{Metadata}.}
\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}.
if NULL, the default assay will be used, see \link{vrMainAssay}.}
\item{group.by}{a column of metadata from \link{Metadata} used as grouping label for the spatial entities}
\item{norm}{if TRUE, the normalized data is used}
\item{pt.size}{point size}
\item{plot.points}{if TRUE, measures are visualized as points as well.}
\item{ncol}{column wise number of plots, for \link{ggarrange}}
\item{nrow}{row wise number of plots, for \link{ggarrange}}
}
\description{
vrViolinPlot
}