[413088]: / tests / testthat / test-data.R

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# Testing functions of assay data ####
test_that("data", {
# get data
data("visium_data")
# get and set feature types
vrMainFeatureType(visium_data)
vrMainFeatureType(visium_data, assay = "Assay1") <- "RNA"
expect_warning(vrMainFeatureType(visium_data) <- "main")
# get data
data <- vrData(visium_data, norm = FALSE)
data <- vrData(visium_data, norm = TRUE)
data <- vrData(visium_data, assay = "Assay1", norm = TRUE)
# get data with features
data <- vrData(visium_data, features = vrFeatures(visium_data)[1:2], norm = FALSE)
expect_error(data <- vrData(visium_data, features = "feature", norm = FALSE))
data <- vrData(visium_data, features = vrFeatures(visium_data)[1:2], norm = TRUE)
expect_error(data <- vrData(visium_data, features = "feature", norm = TRUE))
# return
expect_equal(1,1L)
})