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b/man/vrMainSpatial.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/allgenerics.R, R/image.R |
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\name{vrMainSpatial} |
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\alias{vrMainSpatial} |
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\alias{vrMainSpatial,VoltRon-method} |
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\alias{vrMainSpatial,vrAssay-method} |
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\alias{vrMainSpatial,vrAssayV2-method} |
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\alias{vrMainSpatial<-,VoltRon-method} |
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\alias{vrMainSpatial<-,vrAssay-method} |
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\alias{vrMainSpatial<-,vrAssayV2-method} |
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\alias{vrMainSpatial<-} |
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\title{vrMainSpatial} |
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\usage{ |
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vrMainSpatial(object, ...) |
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\S4method{vrMainSpatial}{VoltRon}(object, assay = NULL) |
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\S4method{vrMainSpatial}{vrAssay}(object) |
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\S4method{vrMainSpatial}{vrAssayV2}(object) |
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\S4method{vrMainSpatial}{VoltRon}(object, assay = NULL) <- value |
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\S4method{vrMainSpatial}{vrAssay}(object, ignore = FALSE) <- value |
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\S4method{vrMainSpatial}{vrAssayV2}(object, ignore = FALSE) <- value |
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vrMainSpatial(object, ...) <- value |
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} |
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\arguments{ |
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\item{object}{a VoltRon or vrAssay object.} |
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\item{...}{arguments passed to other methods.} |
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\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. |
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if NULL, the default assay will be used, see \link{vrMainAssay}.} |
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\item{value}{the name of main spatial coordinate system} |
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\item{ignore}{if TRUE, the non-existing spatial coordinate system will be ignored.} |
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} |
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\description{ |
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Get the main spatial system name |
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Set the main image |
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} |