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b/man/vrImages.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/allgenerics.R, R/image.R |
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\name{vrImages} |
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\alias{vrImages} |
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\alias{vrImages,VoltRon-method} |
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\alias{vrImages,vrAssay-method} |
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\alias{vrImages,vrAssayV2-method} |
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\alias{vrImages,vrImage-method} |
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\alias{vrImages,vrSpatial-method} |
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\alias{vrImages<-,vrAssay-method} |
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\alias{vrImages<-,vrAssayV2-method} |
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\alias{vrImages<-,vrImage-method} |
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\alias{vrImages<-,vrSpatial-method} |
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\alias{vrImages<-} |
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\title{vrImages} |
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\usage{ |
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vrImages(object, ...) |
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\S4method{vrImages}{VoltRon}( |
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object, |
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assay = NULL, |
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name = NULL, |
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reg = FALSE, |
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channel = NULL, |
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as.raster = FALSE, |
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scale.perc = 100 |
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) |
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\S4method{vrImages}{vrAssay}( |
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object, |
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name = NULL, |
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reg = FALSE, |
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channel = NULL, |
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as.raster = FALSE, |
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scale.perc = 100 |
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) |
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\S4method{vrImages}{vrAssayV2}( |
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object, |
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name = NULL, |
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reg = FALSE, |
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channel = NULL, |
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as.raster = FALSE, |
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scale.perc = 100 |
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) |
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\S4method{vrImages}{vrImage}(object, channel = NULL, as.raster = FALSE, scale.perc = 100) |
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\S4method{vrImages}{vrSpatial}(object, channel = NULL, as.raster = FALSE, scale.perc = 100) |
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\S4method{vrImages}{vrAssay}(object, name = NULL, channel = NULL, reg = FALSE) <- value |
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\S4method{vrImages}{vrAssayV2}(object, name = NULL, channel = NULL, reg = FALSE) <- value |
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\S4method{vrImages}{vrImage}(object, channel = NULL) <- value |
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\S4method{vrImages}{vrSpatial}(object, channel = NULL) <- value |
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vrImages(object, ...) <- value |
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} |
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\arguments{ |
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\item{object}{a VoltRon, vrAssay or vrSpatial object.} |
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\item{...}{arguments passed to other methods.} |
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\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. |
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if NULL, the default assay will be used, see \link{vrMainAssay}.} |
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\item{name}{the name of the main spatial system} |
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\item{reg}{TRUE if registered coordinates of the main image (\link{vrMainSpatial}) is requested} |
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\item{channel}{the name of the channel associated with the image} |
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\item{as.raster}{return as raster} |
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\item{scale.perc}{scale percentage if lower resolution image needed} |
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\item{value}{a raster image or an image of \code{magick-image} object} |
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} |
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\description{ |
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Get images of VoltRon objects |
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} |