--- a +++ b/man/vrGraph.Rd @@ -0,0 +1,24 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/objects.R +\name{vrGraph} +\alias{vrGraph} +\alias{vrGraph<-} +\title{vrGraph} +\usage{ +vrGraph(object, assay = NULL, graph.type = NULL) + +vrGraph(object, assay = NULL, graph.type = "kNN") <- value +} +\arguments{ +\item{object}{a VoltRon object} + +\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. +if NULL, the default assay will be used, see \link{vrMainAssay}.} + +\item{graph.type}{the type of the graph, either custom or given by \link{getProfileNeighbors} or \link{getSpatialNeighbors} functions} + +\item{value}{new graph} +} +\description{ +Get graph of a VoltRon object +}