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b/man/vrBarPlot.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/visualization.R |
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\name{vrBarPlot} |
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\alias{vrBarPlot} |
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\title{vrBarPlot} |
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\usage{ |
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vrBarPlot( |
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object, |
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features = NULL, |
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assay = NULL, |
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x.label = NULL, |
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group.by = "Sample", |
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split.by = NULL, |
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norm = TRUE, |
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log = FALSE, |
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ncol = 2, |
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nrow = NULL |
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) |
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} |
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\arguments{ |
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\item{object}{a VoltRon object} |
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\item{features}{a set of features to be visualized, either from \link{vrFeatures} of raw or normalized data or columns of the \link{Metadata}.} |
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\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. |
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if NULL, the default assay will be used, see \link{vrMainAssay}.} |
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\item{x.label}{labels of the x axis} |
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\item{group.by}{a column of metadata from \link{Metadata} used as grouping label for the spatial entities} |
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\item{split.by}{the column to split the barplots by} |
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\item{norm}{if TRUE, the normalized data is used} |
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\item{log}{if TRUE, data features (excluding metadata features) will be log transformed} |
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\item{ncol}{column wise number of plots, for \link{ggarrange}} |
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\item{nrow}{row wise number of plots, for \link{ggarrange}} |
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} |
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\description{ |
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vrBarPlot |
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} |