--- a +++ b/man/getFeatures.Rd @@ -0,0 +1,32 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/allgenerics.R, R/processing.R +\name{getFeatures} +\alias{getFeatures} +\alias{getFeatures,VoltRon-method} +\alias{getFeatures,vrAssay-method} +\alias{getFeatures,vrAssayV2-method} +\title{getFeatures} +\usage{ +getFeatures(object, ...) + +\S4method{getFeatures}{VoltRon}(object, assay = NULL, max.count = 1, n = 3000) + +\S4method{getFeatures}{vrAssay}(object, max.count = 1, n = 3000) + +\S4method{getFeatures}{vrAssayV2}(object, max.count = 1, n = 3000) +} +\arguments{ +\item{object}{a VoltRon or vrAssay object.} + +\item{...}{arguments passed to other methods.} + +\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. +if NULL, the default assay will be used, see \link{vrMainAssay}.} + +\item{max.count}{maximum count (across spatial points) for low count filtering} + +\item{n}{the top number of variable features} +} +\description{ +Get variable features of assays +}