--- a +++ b/man/generateTileData.Rd @@ -0,0 +1,34 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/allgenerics.R, R/objects.R, R/assay.R +\name{generateTileData} +\alias{generateTileData} +\alias{generateTileData,VoltRon-method} +\alias{generateTileData,vrAssay-method} +\alias{generateTileData,vrAssayV2-method} +\title{generateTileData} +\usage{ +generateTileData(object, ...) + +\S4method{generateTileData}{VoltRon}(object, assay = NULL, ...) + +\S4method{generateTileData}{vrAssay}(object, name = NULL, reg = FALSE, channel = NULL) + +\S4method{generateTileData}{vrAssayV2}(object, name = NULL, reg = FALSE, channel = NULL) +} +\arguments{ +\item{object}{a VoltRon or vrAssay object.} + +\item{...}{additional parameters passed to vrAssay.} + +\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. +if NULL, the default assay will be used, see \link{vrMainAssay}.} + +\item{name}{the name of the main spatial system} + +\item{reg}{TRUE if registered coordinates of the main image (\link{vrMainSpatial}) is requested} + +\item{channel}{the name of the channel associated with the image} +} +\description{ +Generating data matrices for tile-based VoltRon objects from images +}