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b/man/generateTileData.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/allgenerics.R, R/objects.R, R/assay.R |
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\name{generateTileData} |
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\alias{generateTileData} |
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\alias{generateTileData,VoltRon-method} |
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\alias{generateTileData,vrAssay-method} |
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\alias{generateTileData,vrAssayV2-method} |
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\title{generateTileData} |
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\usage{ |
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generateTileData(object, ...) |
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\S4method{generateTileData}{VoltRon}(object, assay = NULL, ...) |
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\S4method{generateTileData}{vrAssay}(object, name = NULL, reg = FALSE, channel = NULL) |
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\S4method{generateTileData}{vrAssayV2}(object, name = NULL, reg = FALSE, channel = NULL) |
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} |
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\arguments{ |
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\item{object}{a VoltRon or vrAssay object.} |
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\item{...}{additional parameters passed to vrAssay.} |
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\item{assay}{assay name (exp: Assay1) or assay class (exp: Visium, Xenium), see \link{SampleMetadata}. |
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if NULL, the default assay will be used, see \link{vrMainAssay}.} |
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\item{name}{the name of the main spatial system} |
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\item{reg}{TRUE if registered coordinates of the main image (\link{vrMainSpatial}) is requested} |
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\item{channel}{the name of the channel associated with the image} |
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} |
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\description{ |
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Generating data matrices for tile-based VoltRon objects from images |
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} |