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b/man/generateCosMxImage.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/import.R |
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\name{generateCosMxImage} |
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\alias{generateCosMxImage} |
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\title{generateCosMxImage} |
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\usage{ |
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generateCosMxImage( |
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dir.path, |
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increase.contrast = TRUE, |
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output.path = NULL, |
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verbose = TRUE, |
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... |
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) |
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} |
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\arguments{ |
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\item{dir.path}{CosMx output folder} |
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\item{increase.contrast}{increase the contrast of the image before writing} |
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\item{output.path}{The path to the new morphology image created if the image should be saved to a location other than Xenium output folder.} |
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\item{verbose}{verbose} |
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\item{...}{additional parameters passed to the \link{writeImage} function} |
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} |
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\description{ |
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Generates a low resolution Morphology image of the CosMx experiment |
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} |