--- a +++ b/man/formAssay.Rd @@ -0,0 +1,46 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/assay.R +\name{formAssay} +\alias{formAssay} +\title{formAssay} +\usage{ +formAssay( + data = NULL, + coords, + segments = list(), + image = NULL, + params = list(), + type = "ROI", + name = "Assay1", + main_image = "image_1", + main_featureset = NULL, + assay_version = "v2", + ... +) +} +\arguments{ +\item{data}{the feature matrix of spatialpoints} + +\item{coords}{the coordinates of the spatial points} + +\item{segments}{the list of segments each associated with a spatial point (optional)} + +\item{image}{a singelton or list of images as magick-image objects} + +\item{params}{additional parameters of the object} + +\item{type}{the type of the assay (tile, molecule, cell, spot or ROI)} + +\item{name}{the name of the assay} + +\item{main_image}{the name of the main_image} + +\item{main_featureset}{the name of the main_featureset} + +\item{assay_version}{the assay version} + +\item{...}{additional arguements passed to \link{formImage}} +} +\description{ +Create a vrAssay (VoltRon assay) object +}