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b/man/as.VoltRon.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/allgenerics.R, R/conversion.R |
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\name{as.VoltRon} |
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\alias{as.VoltRon} |
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\alias{as.VoltRon.Seurat} |
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\alias{as.VoltRon.SpatialExperiment} |
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\title{as.VoltRon} |
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\usage{ |
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as.VoltRon(object, ...) |
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\method{as.VoltRon}{Seurat}( |
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object, |
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type = c("image", "spatial"), |
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assay_name = NULL, |
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verbose = TRUE, |
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... |
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) |
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\method{as.VoltRon}{SpatialExperiment}( |
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object, |
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assay_type = "cell", |
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assay_name = NULL, |
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image_id = NULL, |
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verbose = TRUE, |
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... |
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) |
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} |
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\arguments{ |
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\item{object}{a Seurat or SpatialExperiment object} |
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\item{...}{Additional parameter passed to \link{formVoltRon}} |
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\item{type}{the spatial data type of Seurat object: "image" or "spatial"} |
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\item{assay_name}{the assay name of the voltron assays (e.g. Visium, Xenium etc.)} |
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\item{verbose}{verbose} |
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\item{assay_type}{one of two types, 'cell' or 'spot' etc.} |
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\item{image_id}{select image_id names if needed.} |
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} |
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\description{ |
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Generic methods for conversion into a VoltRon object |
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} |