{"name":"donor_wgs_exclusion_white_gray","url":"http://pancancer.info/data_releases/may2016/pcawg_sample_sheet.v1.4.2016-09-14.tsv, https://wiki.oicr.on.ca/display/PANCANCER/Available+PCAWG+Data#AvailablePCAWGData-May2016Dataset","version":"2017-01-18","cohort":"PCAWG (donor centric)","label":"exclusion/white/gray lists","description":"PCAWG-TECH group donor whole-genome-sequencing exclusion/white/gray lists","type":"clinicalMatrix","dataSubType":"QC"}

{"cohort":"PCAWG (donor centric)","loader":{"duplicate-keys":{"sampleID":[]},"duplicate-probes":["N:alternative_acceptor:chr6:31237763-31322903","N:alternative_acceptor:chr12:125396727-125397866"]},"url":"https://www.synapse.org/#!Synapse:syn8145655","probeMap":"JuncBASE_alternative_acceptor.probeMap","dataSubType":"alternative splicing events","label":"JuncBASE - alternative acceptor exon-exon junction (tumors only)","name":"JuncBASE_alternative_acceptor.donor.xena","wrangling_procedure":"Only tumor data are kept. When multiple tumors are available per donor, the avarage is used as the value for the donor.","type":"genomicMatrix","version":"2017-03-22","unit":"percent of junction inclusion","description":"Start and end coordinates are the exon-exon junction positions. Alternative acceptor junction inclusion estimated by the JuncBASE method. 100.0 means 100% exon inclusion."}

{"cohort":"PCAWG (donor centric)","url":"https://www.synapse.org/#!Synapse:syn8145655","probeMap":"JuncBASE_alternative_donor.probeMap","dataSubType":"alternative splicing events","label":"JuncBASE - alternative donor exon-exon junction (tumors only)","name":"JuncBASE_alternative_donor.donor.xena","wrangling_procedure":"Only tumor data are kept. When multiple tumors are available per donor, the avarage is used as the value for the donor.","type":"genomicMatrix","version":"2017-03-22","unit":"percent of junction inclusion","description":"Start and end coordinates are exon-exon junction positions. Alternative donor exon-exon junction inclusion estimated by the JuncBASE method. 100.0 means 100% exon inclusion."}