TCGA kidney renal papillary cell carcinoma (KIRP) gene-level non-silent somatic mutation (pancan awg)

{"start_index":1,"owner":"TCGA","longTitle":"TCGA kidney renal papillary cell carcinoma (KIRP) somatic mutation (bcm curated)","cohort":"TCGA Kidney Papillary Cell Carcinoma (KIRP)","url":"https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/tumor/kirp/gsc/hgsc.bcm.edu/illuminaga_dnaseq_curated/mutations/","dataSubType":"somatic mutation (SNPs and small INDELs)","security":"public","label":"bcm curated","method":"Baylor pipeline","tags":["cancer"],"path":"data/public/TCGA/KIRP/mutation_curated_bcm","anatomical_origin":["Kidney"],"name":"TCGA.KIRP.sampleMap/mutation_curated_bcm","dataproducer":"Baylor College of Medicine Human Genome Sequencing Center","wrangling_procedure":"Download .maf file from TCGA DCC, removed any calls from WGS samples, processed into UCSC Xena mutation format, stored in the UCSC Xena repository","sample_type":["tumor"],"assembly":"hg19","redistribution":true,"domain":"TCGA","type":"mutationVector","wrangler":"TCGAscript maf processed on 2017-09-08","version":"2017-09-08","gdata_tags":["Baylor College of Medicine Human Genome Sequencing Center"],"primary_disease":"kidney papillary cell carcinoma","platform":"IlluminaGA","description":"TCGA kidney renal papillary cell carcinoma (KIRP) somatic mutation data. Sequencing data are generated on a IlluminaGA system. The calls are generated at Baylor College of Medicine Human Genome Sequencing Center using the Baylor pipeline method.","wholegenome":true}

TCGA kidney renal papillary cell carcinoma (KIRP) somatic mutation (bcm curated)

{"cohort":"TCGA Kidney Papillary Cell Carcinoma (KIRP)","clinicalfeature":"TCGA.KIRP.sampleMap/KIRP_clinicalFeature","url":"https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/tumor/kirp/bcr/","label":"Phenotypes","version":"2016-04-27","dataSubType":"phenotype","type":"clinicalMatrix","name":"TCGA.KIRP.sampleMap/KIRP_clinicalMatrix"}