{"cohort":"MAGIC","url":"http://www.ncbi.nlm.nih.gov/pubmed/22832581","probeMap":"probeMap/hugo_gencode_good_hg19_V24lift37_probemap","dataSubType":"copy number","citation":"Nature. 2012 Aug 2;488(7409):49-56. doi: 10.1038/nature11327","label":"MAGIC gistic2 CNV (thresholded)","author":"Paul A. Northcott, David J. H. Shih et. al.","articletitle":"Subgroup-specific structural variation across 1,000 medulloblastoma genomes","name":"MAGIC/all_samp.cnvProcess","redistribution":true,"type":"genomicMatrix","version":"2015-03-19","unit":"-2,-1,0,1,2","pmid":22832581,"description":"Treehouse - MAGIC - Medulloblastoma Advanced Genomics International Consortium Gistic2 copy number estimation.<br><br> homozygous deletion: -2<br> deletion: -1<br> balanced: 0<br> gain: 1<br> high-level amplification: 2"}

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{"cohort":"MAGIC","url":"http://www.ncbi.nlm.nih.gov/pubmed/22832581","probeMap":"probeMap/GPL6244.hg19.probeMap","dataSubType":"gene expression Array","citation":"Nature. 2012 Aug 2;488(7409):49-56. doi: 10.1038/nature11327","label":"MAGIC gene expression","author":"Paul A. Northcott, David J. H. Shih et. al.","articletitle":"Subgroup-specific structural variation across 1,000 medulloblastoma genomes","name":"MAGIC/magicExpression","wrangling_procedure":"Download data from GE0:GSE37382, run RMA (Robust Multi-array Average) to estimate probe-level expression.","redistribution":true,"type":"genomicMatrix","version":"2015-03-19","colnormalization":true,"pmid":2.283e7,"description":"Treehouse - MAGIC - Medulloblastoma Advanced Genomics International Consortium gene expression by microarray. Identifiers are Affymetrix Human Gene 1.0 ST Array probes."}