{"cohort":"MAGIC","url":"http://www.nature.com/nature/journal/v488/n7409/extref/nature11327-s2.zip","dataSubType":"phenotype","citation":"Nature. 2012 Aug 2;488(7409):49-56. doi: 10.1038/nature11327","label":"phenotype","author":"Paul A. Northcott, David J. H. Shih et. al.","articletitle":"Subgroup-specific structural variation across 1,000 medulloblastoma genomes","name":"MAGIC/phenotype","redistribution":true,"clinicalfeature":"MAGIC/phenotype_dictionary","type":"clinicalMatrix","version":"2015-03-19","pmid":22832581,"description":"Treehouse - MAGIC - Medulloblastoma Advanced Genomics International Consortium cohort phenotype data. From publication suppl 2012-01-00811C-SupplementaryTable-3-MetaData.xlsx"}

{"idtype":"probe","label":"Affy Human 250K Sty array (hg18) e.g. SNP_A-1908463","author":"Chris Szeto","name":"probeMap/probeAffy250KstyI","assembly":"hg18","type":"probeMap","wrangler":"Chris Szeto","version":"2012-06-14","notes":"did not double check hg18"}

{"longTitle":"Melanoma 250K CGH (Lin et al. 2008)","cohort":"Melanoma (Lin 2008)","url":"http://www.ncbi.nlm.nih.gov/pubmed/18245465","probeMap":"probeMap/probeAffy250KstyI","dataSubType":"copy number","citation":"Cancer Res. 2008 Feb 1;68(3):664-73.","label":"Lin CGH","articletitle":"Modeling genomic diversity and tumor dependency in malignant melanoma.","tags":["cancer"],"anatomical_origin":["Skin"],"name":"lin2008_public/lin2008cnv250K_genomicMatrix","dataproducer":"Lin WM, Baker AC, Beroukhim R, Winckler W, Feng W, Marmion JM, Laine E, Greulich H, Tseng H, Gates C, Hodi FS, Dranoff G, Sellers WR, Thomas RK, Meyerson M, Golub TR, Dummer R, Herlyn M, Getz G, Garraway LA.","wrangling_procedure":"Data was obtained from the Broad Institutes public portal (<A HREF=\"http://www.broad.mit.edu/melanoma\">link to portal</A>). Affymetrix HG-U133 probes were then mapped to the genome using mappings obtained from the UCSC table browser.","sample_type":["tumor"],"type":"genomicMatrix","wrangler":"Chris Szeto","version":"2011-11-01","primary_disease":"melanoma"}