{"start_index":1,"cohort":"GDC TCGA Large B-cell Lymphoma (DLBC)","url":"https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-100, https://api.gdc.cancer.gov/data/c3df46a9-85d1-45d4-954a-825313d4a26d","dataSubType":"somatic mutation (SNPs and small INDELs)","label":"MuTect2 Variant Aggregation and Masking","name":"TCGA-DLBC/Xena_Matrices/TCGA-DLBC.mutect2_snv.tsv","dataproducer":"Genomic Data Commons","wrangling_procedure":"Data from different samples is combined into mutationVector; \"Hugo_Symbol\", \"Chromosome\", \"Start_Position\", \"End_Position\", \"Reference_Allele\", \"Tumor_Seq_Allele2\", \"Tumor_Sample_Barcode\", \"HGVSp_Short\" and \"Consequence\" data are renamed accordingly and presented; \"dna_vaf\" data is added and is calculated by \"t_alt_count\"/\"t_depth\".","assembly":"hg38","type":"mutationVector","wrangler":"Xena GDC ETL script","version":"02-04-2018","platform":"Illumina"}

{"start_index":1,"cohort":"GDC TCGA Large B-cell Lymphoma (DLBC)","url":"https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-100, https://api.gdc.cancer.gov/data/85f382f8-0155-4fe9-af0c-5813587d1f63","dataSubType":"somatic mutation (SNPs and small INDELs)","label":"SomaticSniper Variant Aggregation and Masking","name":"TCGA-DLBC/Xena_Matrices/TCGA-DLBC.somaticsniper_snv.tsv","dataproducer":"Genomic Data Commons","wrangling_procedure":"Data from different samples is combined into mutationVector; \"Hugo_Symbol\", \"Chromosome\", \"Start_Position\", \"End_Position\", \"Reference_Allele\", \"Tumor_Seq_Allele2\", \"Tumor_Sample_Barcode\", \"HGVSp_Short\" and \"Consequence\" data are renamed accordingly and presented; \"dna_vaf\" data is added and is calculated by \"t_alt_count\"/\"t_depth\".","assembly":"hg38","type":"mutationVector","wrangler":"Xena GDC ETL script","version":"02-04-2018","platform":"Illumina"}

{"name":"TCGA-DLBC/Xena_Matrices/TCGA-DLBC.survival.tsv","cohort":"GDC TCGA Large B-cell Lymphoma (DLBC)","url":"https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-90, https://api.gdc.cancer.gov/data/","dataSubType":"phenotype","dataproducer":"Genomic Data Commons","label":"survival data","type":"clinicalMatrix","wrangler":"Xena GDC ETL script","version":"10-25-2017"}