{"longTitle":"Pancreatic Cancer Gene Expression (Balagurunathan et al. 2008)","cohort":"Pancreatic Cancer (Balagurunathan 2008)","url":"http://www.ncbi.nlm.nih.gov/pubmed/18765825","probeMap":"balagurunathan2008_public/Human1A_G4110AunionG4110BProbes","dataSubType":"gene expression","citation":"Mol Cancer Ther. 2008 Sep;7(9):3071-80. Epub 2008 Sep 2.","label":"gene expression","articletitle":"Gene expression profiling-based identification of cell-surface targets for developing multimeric ligands in pancreatic cancer.","tags":["cancer"],"anatomical_origin":["Pancreas"],"name":"balagurunathan2008_public/balagurunathan2008_genomicMatrix","dataproducer":"Balagurunathan Y, Morse DL, Hostetter G, Shanmugam V, Stafford P, Shack S, Pearson J, Trissal M, Demeure MJ, Von Hoff DD, Hruby VJ, Gillies RJ, Han H.","wrangling_procedure":"SOFT format files were downloaded from GEO(<A HREF=\"http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE11838\">Link to GEO entry</A>). All values were log-transformed, then median centered. hg18 genome coordinates provided in the SOFT file were used to make bed15 format files.","sample_type":["tumor"],"type":"genomicMatrix","wrangler":"Chris Szeto","version":"2011-11-01","gdata_tags":["transcription","mRNA"],"primary_disease":"pancreas cancer"}

Pancreatic Cancer Gene Expression (Balagurunathan et al. 2008)

{"cohort":"Pancreatic Cancer (Balagurunathan 2008)","dataSubType":"phenotype","label":"Phenotypes","tags":["cancer"],"name":"balagurunathan2008_public/balagurunathan2008_public_clinicalMatrix","clinicalfeature":"balagurunathan2008_public/balagurunathan2008_public_clinicalFeature","type":"clinicalMatrix","wrangler":"Chris Szeto","version":"2011-11-11"}

{"longTitle":"Pancreatic Cancer CGH (Harada et al. 2008)","cohort":"Pancreatic Cancer (Harada 2008)","url":"http://www.ncbi.nlm.nih.gov/pubmed/17952125","probeMap":"probeMap/probesAffy100K","dataSubType":"copy number","citation":"Oncogene. 2008 Mar 20;27(13):1951-60. Epub 2007 Oct 22.","label":"Harada CGH","articletitle":"Genome-wide DNA copy number analysis in pancreatic cancer using high-density single nucleotide polymorphism arrays.","tags":["cancer"],"anatomical_origin":["Pancreas"],"name":"harada2008_public/harada2008_genomicMatrix","dataproducer":"Harada T, Chelala C, Bhakta V, Chaplin T, Caulee K, Baril P, Young BD, Lemoine NR.","wrangling_procedure":"Obtained SOFT file for processed Affymetrix 100K data from GEO (<A HREF=\"http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7130\">link to GEO entry</A>). Processed data includes copy number alterations calculated by GeneChip.","sample_type":["tumor"],"type":"genomicMatrix","wrangler":"Chris Szeto","version":"2011-11-01","primary_disease":"pancreas cancer"}