TCGA uterine corpus endometrioid carcinoma (UCEC) somatic mutation (wustl_hiseq automated)

{"cgdataversion":1,"owner":"TCGA","longTitle":"TCGA uterine corpus endometrioid carcinoma (UCEC) phospho- or total protein expression by reverse phase protein array (replicate-base normalization)","cohort":"TCGA Endometrioid Cancer (UCEC)","url":"https://www.synapse.org/#!Synapse:syn1759392","dataSubType":"protein expression RPPA","security":"public","label":"RPPA (replicate-base normalization)","tags":["cancer","uterus"],"path":"data/public/TCGA/UCEC/RPPA_RBN","anatomical_origin":["Endometrium"],"name":"TCGA.UCEC.sampleMap/RPPA_RBN","dataproducer":"MDACC","wrangling_procedure":"Data download from https://www.synapse.org/#!Synapse:syn1759392, processed into antibody by sample matrix at UCSC into Xena repository","sample_type":["tumor"],"redistribution":true,"domain":"TCGA","groupTitle":"TCGA uterine corpus endometrioid carcinoma","type":"genomicMatrix","wrangler":"cgData TCGAscript RPPA_RBN processed on 2017-09-08","version":"2017-09-08","unit":"RBN normalized RPPA value","primary_disease":"uterine corpus endometrioid carcinoma","description":"TCGA uterine corpus endometrioid carcinoma (UCEC) protein expression data for 131 proteins, measured by RPPA (reverse phase protein array) technology. These data have been normalized by RBN (replicate-base normalization) method developed by MDACC. Details: https://www.synapse.org/#!Synapse:syn1750330 and http://bioinformatics.mdanderson.org/main/TCPA:Overview.<br><br>"}

TCGA uterine corpus endometrioid carcinoma (UCEC) phospho- or total protein expression by reverse phase protein array (replicate-base normalization)

TCGA uterine corpus endometrioid carcinoma (UCEC) gene expression by RNAseq (polyA+ IlluminaHiSeq percentile)

{"cgdataversion":1,"owner":"TCGA","longTitle":"TCGA uterine corpus endometrioid carcinoma (UCEC) miRNA mature strand expression by RNAseq (IlluminaGA)","cohort":"TCGA Endometrioid Cancer (UCEC)","url":"https://tcga-data.nci.nih.gov/tcgafiles/ftp_auth/distro_ftpusers/anonymous/tumor/ucec/cgcc/bcgsc.ca/illuminaga_mirnaseq/mirnaseq/","dataSubType":"miRNA mature strand expression RNAseq","security":"public","label":"IlluminaGA","tags":["cancer","uterus"],"path":"data/public/TCGA/UCEC/miRNA_GA_gene","anatomical_origin":["Endometrium"],"name":"TCGA.UCEC.sampleMap/miRNA_GA_gene","dataproducer":"British Columbia Cancer Agency TCGA genome characterization center","wrangling_procedure":"Level_3 Data (file names: *.isoform.quantification.txt) download from TCGA DCC, for each sample, all isoform expression for the same miRNA mature strand are added together, log2(total_RPM +1) transformed, and deposited at UCSC into Xena repository.","sample_type":["tumor"],"redistribution":true,"domain":"TCGA","type":"genomicMatrix","wrangler":"cgData TCGAscript miRNAseq processed on 2017-09-08","version":"2017-09-08","gdata_tags":["transcription","miRNA"],"unit":"log2(RPM+1)","primary_disease":"uterine corpus endometrioid carcinoma","platform":"IlluminaGA_miRNASeq","colnormalization":true}