{"start_index":1,"cohort":"GDC TCGA Kidney Clear Cell Carcinoma (KIRC)","url":"https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-100, https://api.gdc.cancer.gov/data/716f5244-9e13-4375-8c30-147bf9a02bb4","dataSubType":"somatic mutation (SNPs and small INDELs)","label":"MuSE Variant Aggregation and Masking","name":"TCGA-KIRC/Xena_Matrices/TCGA-KIRC.muse_snv.tsv","dataproducer":"Genomic Data Commons","wrangling_procedure":"Data from different samples is combined into mutationVector; \"Hugo_Symbol\", \"Chromosome\", \"Start_Position\", \"End_Position\", \"Reference_Allele\", \"Tumor_Seq_Allele2\", \"Tumor_Sample_Barcode\", \"HGVSp_Short\" and \"Consequence\" data are renamed accordingly and presented; \"dna_vaf\" data is added and is calculated by \"t_alt_count\"/\"t_depth\".","assembly":"hg38","type":"mutationVector","wrangler":"Xena GDC ETL script","version":"02-04-2018","platform":"Illumina"}

{"start_index":1,"cohort":"GDC TCGA Kidney Clear Cell Carcinoma (KIRC)","url":"https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-100, https://api.gdc.cancer.gov/data/2a8f2c83-8b5e-4987-8dbf-01f7ee24dc26","dataSubType":"somatic mutation (SNPs and small INDELs)","label":"MuTect2 Variant Aggregation and Masking","name":"TCGA-KIRC/Xena_Matrices/TCGA-KIRC.mutect2_snv.tsv","dataproducer":"Genomic Data Commons","wrangling_procedure":"Data from different samples is combined into mutationVector; \"Hugo_Symbol\", \"Chromosome\", \"Start_Position\", \"End_Position\", \"Reference_Allele\", \"Tumor_Seq_Allele2\", \"Tumor_Sample_Barcode\", \"HGVSp_Short\" and \"Consequence\" data are renamed accordingly and presented; \"dna_vaf\" data is added and is calculated by \"t_alt_count\"/\"t_depth\".","assembly":"hg38","type":"mutationVector","wrangler":"Xena GDC ETL script","version":"02-04-2018","platform":"Illumina"}

{"start_index":1,"cohort":"GDC TCGA Kidney Clear Cell Carcinoma (KIRC)","url":"https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-100, https://api.gdc.cancer.gov/data/4c3a899f-be0f-454f-b5dc-e30e29314c49","dataSubType":"somatic mutation (SNPs and small INDELs)","label":"SomaticSniper Variant Aggregation and Masking","name":"TCGA-KIRC/Xena_Matrices/TCGA-KIRC.somaticsniper_snv.tsv","dataproducer":"Genomic Data Commons","wrangling_procedure":"Data from different samples is combined into mutationVector; \"Hugo_Symbol\", \"Chromosome\", \"Start_Position\", \"End_Position\", \"Reference_Allele\", \"Tumor_Seq_Allele2\", \"Tumor_Sample_Barcode\", \"HGVSp_Short\" and \"Consequence\" data are renamed accordingly and presented; \"dna_vaf\" data is added and is calculated by \"t_alt_count\"/\"t_depth\".","assembly":"hg38","type":"mutationVector","wrangler":"Xena GDC ETL script","version":"02-04-2018","platform":"Illumina"}