--- a +++ b/man/seek_gtex_organ.Rd @@ -0,0 +1,25 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/SeekGtexOrgan.R +\name{seek_gtex_organ} +\alias{seek_gtex_organ} +\title{Load and Process GTEX Phenotype Data to Retrieve Primary Site Counts} +\usage{ +seek_gtex_organ(path = "./download_data/GTEX_phenotype") +} +\arguments{ +\item{path}{The path to the GTEX phenotype data file. Default is "./download_data/GTEX_phenotype".} +} +\value{ +A table representing the count of samples per primary site. +} +\description{ +This function reads the GTEX phenotype data from a specified path, renames its columns for better readability, +and then returns a table of primary site counts. +} +\examples{ +# Get the file path to the example data in the package +path <- system.file("extdata", "GTEX_phenotype_test", package = "TransProR") +# Call the `seek_gtex_organ` function with the path and print the result +SeekGtexOrgan <- seek_gtex_organ(path = path) + +}