a b/man/seek_gtex_organ.Rd
1
% Generated by roxygen2: do not edit by hand
2
% Please edit documentation in R/SeekGtexOrgan.R
3
\name{seek_gtex_organ}
4
\alias{seek_gtex_organ}
5
\title{Load and Process GTEX Phenotype Data to Retrieve Primary Site Counts}
6
\usage{
7
seek_gtex_organ(path = "./download_data/GTEX_phenotype")
8
}
9
\arguments{
10
\item{path}{The path to the GTEX phenotype data file. Default is "./download_data/GTEX_phenotype".}
11
}
12
\value{
13
A table representing the count of samples per primary site.
14
}
15
\description{
16
This function reads the GTEX phenotype data from a specified path, renames its columns for better readability,
17
and then returns a table of primary site counts.
18
}
19
\examples{
20
# Get the file path to the example data in the package
21
path <- system.file("extdata", "GTEX_phenotype_test", package = "TransProR")
22
# Call the `seek_gtex_organ` function with the path and print the result
23
SeekGtexOrgan <- seek_gtex_organ(path = path)
24
25
}