--- a
+++ b/NAMESPACE
@@ -0,0 +1,177 @@
+# Generated by roxygen2: do not edit by hand
+
+export("%>%")
+export(Combat_Normal)
+export(Contrast_Venn)
+export(DESeq2_analyze)
+export(Wilcoxon_analyze)
+export(add_boxplot)
+export(add_new_tile_layer)
+export(adjust_alpha_scale)
+export(adjust_color_tone)
+export(adjust_export_pathway)
+export(circos_fruits)
+export(combat_tumor)
+export(compare_merge)
+export(create_base_plot)
+export(deg_filter)
+export(drawLegends)
+export(edgeR_analyze)
+export(enrich_circo_bar)
+export(enrich_polar_bubble)
+export(enrichment_circlize)
+export(enrichment_spiral_plots)
+export(extract_descriptions_counts)
+export(extract_ntop_pathways)
+export(extract_positive_pathways)
+export(facet_density_foldchange)
+export(filter_diff_genes)
+export(four_degs_venn)
+export(gather_graph_edge)
+export(gather_graph_node)
+export(gene_color)
+export(gene_highlights)
+export(gene_map_pathway)
+export(get_gtex_exp)
+export(get_tcga_exp)
+export(highlight_by_node)
+export(highlight_genes)
+export(limma_analyze)
+export(log_transform)
+export(merge_density_foldchange)
+export(merge_gtex_tcga)
+export(merge_id_position)
+export(merge_method_color)
+export(new_ggraph)
+export(pathway_count)
+export(pathway_description)
+export(prep_deseq2)
+export(prep_edgeR)
+export(prep_limma)
+export(prep_wilcoxon)
+export(process_heatdata)
+export(seek_gtex_organ)
+export(selectPathways)
+export(spiral_newrle)
+importFrom(ComplexHeatmap,Legend)
+importFrom(ComplexHeatmap,draw)
+importFrom(ComplexHeatmap,packLegend)
+importFrom(DESeq2,DESeq)
+importFrom(DESeq2,DESeqDataSetFromMatrix)
+importFrom(DESeq2,results)
+importFrom(Hmisc,capitalize)
+importFrom(circlize,chordDiagram)
+importFrom(dplyr,across)
+importFrom(dplyr,all_of)
+importFrom(dplyr,arrange)
+importFrom(dplyr,bind_rows)
+importFrom(dplyr,desc)
+importFrom(dplyr,distinct)
+importFrom(dplyr,filter)
+importFrom(dplyr,group_by)
+importFrom(dplyr,inner_join)
+importFrom(dplyr,mutate)
+importFrom(dplyr,n)
+importFrom(dplyr,pull)
+importFrom(dplyr,row_number)
+importFrom(dplyr,select)
+importFrom(dplyr,summarise)
+importFrom(edgeR,DGEList)
+importFrom(edgeR,calcNormFactors)
+importFrom(edgeR,cpm)
+importFrom(edgeR,estimateGLMCommonDisp)
+importFrom(edgeR,estimateGLMTagwiseDisp)
+importFrom(edgeR,estimateGLMTrendedDisp)
+importFrom(edgeR,filterByExpr)
+importFrom(edgeR,glmFit)
+importFrom(edgeR,glmLRT)
+importFrom(edgeR,topTags)
+importFrom(geomtextpath,geom_textpath)
+importFrom(ggVennDiagram,ggVennDiagram)
+importFrom(ggalt,stat_xspline)
+importFrom(ggdensity,geom_hdr)
+importFrom(ggdensity,geom_hdr_rug)
+importFrom(ggnewscale,new_scale)
+importFrom(ggnewscale,new_scale_fill)
+importFrom(ggplot2,aes)
+importFrom(ggplot2,aes_string)
+importFrom(ggplot2,alpha)
+importFrom(ggplot2,annotate)
+importFrom(ggplot2,coord_cartesian)
+importFrom(ggplot2,coord_polar)
+importFrom(ggplot2,element_blank)
+importFrom(ggplot2,element_rect)
+importFrom(ggplot2,expansion)
+importFrom(ggplot2,facet_wrap)
+importFrom(ggplot2,geom_bar)
+importFrom(ggplot2,geom_hline)
+importFrom(ggplot2,geom_point)
+importFrom(ggplot2,geom_segment)
+importFrom(ggplot2,geom_smooth)
+importFrom(ggplot2,geom_text)
+importFrom(ggplot2,ggplot)
+importFrom(ggplot2,guide_legend)
+importFrom(ggplot2,labs)
+importFrom(ggplot2,margin)
+importFrom(ggplot2,scale_alpha_continuous)
+importFrom(ggplot2,scale_color_brewer)
+importFrom(ggplot2,scale_color_manual)
+importFrom(ggplot2,scale_fill_gradient)
+importFrom(ggplot2,scale_fill_identity)
+importFrom(ggplot2,scale_fill_manual)
+importFrom(ggplot2,scale_size)
+importFrom(ggplot2,scale_x_continuous)
+importFrom(ggplot2,scale_y_continuous)
+importFrom(ggplot2,theme)
+importFrom(ggplot2,theme_minimal)
+importFrom(ggplot2,theme_void)
+importFrom(ggplot2,unit)
+importFrom(ggpubr,stat_cor)
+importFrom(ggraph,geom_edge_diagonal)
+importFrom(ggraph,geom_node_point)
+importFrom(ggraph,geom_node_text)
+importFrom(ggraph,ggraph)
+importFrom(ggraph,node_angle)
+importFrom(ggraph,scale_edge_colour_brewer)
+importFrom(ggtree,aes)
+importFrom(ggtree,geom_hilight)
+importFrom(ggtree,geom_point2)
+importFrom(grDevices,col2rgb)
+importFrom(grDevices,convertColor)
+importFrom(grDevices,rgb)
+importFrom(graphics,strwidth)
+importFrom(grid,gpar)
+importFrom(grid,grid.roundrect)
+importFrom(grid,grid.text)
+importFrom(grid,pushViewport)
+importFrom(grid,unit)
+importFrom(grid,upViewport)
+importFrom(grid,viewport)
+importFrom(hrbrthemes,theme_ipsum)
+importFrom(limma,contrasts.fit)
+importFrom(limma,eBayes)
+importFrom(limma,lmFit)
+importFrom(limma,topTable)
+importFrom(magrittr,"%>%")
+importFrom(rlang,.data)
+importFrom(rlang,sym)
+importFrom(spiralize,spiral_initialize)
+importFrom(spiralize,spiral_rect)
+importFrom(spiralize,spiral_text)
+importFrom(spiralize,spiral_track)
+importFrom(stats,as.formula)
+importFrom(stats,model.matrix)
+importFrom(stats,na.omit)
+importFrom(stats,p.adjust)
+importFrom(stats,quantile)
+importFrom(stats,wilcox.test)
+importFrom(stringr,str_c)
+importFrom(sva,ComBat_seq)
+importFrom(tibble,as_tibble)
+importFrom(tibble,column_to_rownames)
+importFrom(tibble,tibble)
+importFrom(tidygraph,tbl_graph)
+importFrom(tidyr,unite)
+importFrom(utils,head)
+importFrom(utils,read.table)
+importFrom(utils,tail)