RenalTumor / Git / Commit [40a513]

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Commit [40a513] main

Initial commit

Authored by: AlyssaS 2025-04-19

Browse code at this revision

Parent: [9c539a]

<< < 1 2 3 > >> (Page 2 of 3)

added	Functions/Filter.gene.R
added	Functions/IDConvert.R
added	Functions/Integrate.scRNA.scATAC.R
added	Functions/Plot_colorPaletters.R
added	Functions/analysis.diff.survival.TCGA.R
added	Functions/clusterProfiler.enricher.R
added	Functions/plot.violin.R
added	Functions/variableFeatureSelection.R
added	README.md
added	RNA-seq/AnalysisPipeline/1.preProcessData.R
added	RNA-seq/AnalysisPipeline/2.AnnotatedCluster.R
added	RNA-seq/AnalysisPipeline/3.CNV.estimate.R
added	RNA-seq/AnalysisPipeline/4.1.NMF.R
added	RNA-seq/AnalysisPipeline/4.2.NMF.cCRE.R
added	RNA-seq/AnalysisPipeline/5.1.Immune.CD8T.R
added	RNA-seq/AnalysisPipeline/5.2.Immune.Macrophage.R
added	RNA-seq/AnalysisPipeline/6.1.cellphoneDB.constructDB.R
added	RNA-seq/AnalysisPipeline/6.2.cellphoneDB.run.R
added	RNA-seq/AnalysisPipeline/6.3.cellphoneDB.analysis.R
added	RNA-seq/AnalysisPipeline/6.4.Visualizing.network.R
added	RNA-seq/AnalysisPipeline/Endothelial.R
added	RNA-seq/AnalysisPipeline/NK.analysis.R
added	RNA-seq/Functions/Plot.Sankey.R
added	RNA-seq/Functions/RCC.ICB.analysis.R
added	RNA-seq/Functions/cellphoneDB.dotplot.R

Functions/Filter.gene.R Diff Switch to side-by-side view

Functions/IDConvert.R Diff Switch to side-by-side view

Functions/Integrate.scRNA.scATAC.R Diff Switch to side-by-side view

Functions/Plot_colorPaletters.R Diff Switch to side-by-side view

Functions/analysis.diff.survival.TCGA.R Diff Switch to side-by-side view

Functions/clusterProfiler.enricher.R Diff Switch to side-by-side view

Functions/plot.violin.R Diff Switch to side-by-side view

Functions/variableFeatureSelection.R Diff Switch to side-by-side view

README.md Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/1.preProcessData.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/2.AnnotatedCluster.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/3.CNV.estimate.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/4.1.NMF.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/4.2.NMF.cCRE.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/5.1.Immune.CD8T.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/5.2.Immune.Macrophage.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/6.1.cellphoneDB.constructDB.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/6.2.cellphoneDB.run.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/6.3.cellphoneDB.analysis.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/6.4.Visualizing.network.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/Endothelial.R Diff Switch to side-by-side view

RNA-seq/AnalysisPipeline/NK.analysis.R Diff Switch to side-by-side view

RNA-seq/Functions/Plot.Sankey.R Diff Switch to side-by-side view

RNA-seq/Functions/RCC.ICB.analysis.R Diff Switch to side-by-side view

RNA-seq/Functions/cellphoneDB.dotplot.R Diff Switch to side-by-side view

<< < 1 2 3 > >> (Page 2 of 3)