Datasets
Models
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--- a +++ b/data/motifTable.txt @@ -0,0 +1,333 @@ +Filename Name Consensus Factor Name DBD Submotif Cell Type IP Assay GEO ID Source Symbol +ap1.motif AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer ATGACTCATC AP-1 bZIP canonical ThioMac PU.1 ChIP-Seq GSE21512 Homer FOS +ap2gamma.motif AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer SCCTSAGGSCAW AP-2gamma AP2 canonical MCF7 TFAP2C ChIP-Seq GSE21234 Homer TFAP2C +ap2.motif AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer ATGCCCTGAGGC AP-2alpha AP2 canonical Hela AP2alpha ChIP-Seq GSE31477 Homer TFAP2A +ap4.motif Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer NAHCAGCTGD Ap4 bHLH canonical AML Tfap4 ChIP-Seq GSE45738 Homer TFAP4 +are-fox.motif FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer AGTAAACAAAAAAGAACANA FOXA1:AR Forkhead,NR canonical LNCAP AR ChIP-Seq GSE27824 Homer +are.motif ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer AGAACAGNCTGTTCTT ARE NR canonical LNCAP AR ChIP-Seq GSE27824 Homer AR +ar-half.motif AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer CCAGGAACAG AR-halfsite NR canonical LNCaP AR ChIP-Seq GSE27824 Homer +arnt.motif Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer TBGCACGCAA Arnt:Ahr bHLH canonical MCF7 Arnt ChIP-Seq Lo_et_al. Homer ARNT +ascl1.motif Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer NNVVCAGCTGBN Ascl1 bHLH canonical NeuralTubes Ascl1 ChIP-Seq GSE55840 Homer ASCL1 +atf1.motif Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer GATGACGTCA Atf1 bZIP canonical K562 ATF1 ChIP-Seq GSE31477 Homer ATF1 +atf2.motif Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer NRRTGACGTCAT Atf2 bZIP canonical 3T3L1 Atf2 ChIP-Seq GSE56872 Homer ATF2 +atf3.motif Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer DATGASTCATHN Atf3 bZIP canonical GBM ATF3 ChIP-Seq GSE33912 Homer ATF3 +atf4.motif Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer MTGATGCAAT Atf4 bZIP canonical MEF Atf4 ChIP-Seq GSE35681 Homer ATF4 +atf7.motif Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer NGRTGACGTCAY Atf7 bZIP canonical 3T3L1 Atf7 ChIP-Seq GSE56872 Homer ATF7 +atoh1.motif Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer VNAVCAGCTGGC Atoh1 bHLH canonical Cerebellum Atoh1 ChIP-Seq GSE22111 Homer ATOH1 +bach1.motif Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer AWWNTGCTGAGTCAT Bach1 bZIP canonical K562 Bach1 ChIP-Seq GSE31477 Homer BACH1 +bach2.motif Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer TGCTGAGTCA Bach2 bZIP canonical OCILy7 Bach2 ChIP-Seq GSE44420 Homer BACH2 +bapx1.motif Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer TTRAGTGSYK Bapx1 Homeobox canonical VertebralCol Bapx1 ChIP-Seq GSE36672 Homer NKX3-2 +batf3-irf8.motif IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer CTTTCANTATGACTV IRF:BATF IRF:bZIP canonical pDC Irf8 ChIP-Seq GSE66899 Homer +batf.motif BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer DATGASTCAT BATF bZIP canonical Th17 BATF ChIP-Seq GSE39756 Homer BATF +bcl6.motif Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer NNNCTTTCCAGGAAA Bcl6 Zf canonical Liver Bcl6 ChIP-Seq GSE31578 Homer BCL6 +bhlhe40.motif bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer KCACGTGMCN bHLHE40 bHLH canonical HepG2 BHLHE40 ChIP-Seq GSE31477 Homer BHLHE40 +bmal.motif BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer GNCACGTG BMAL1 bHLH canonical Liver Bmal1 ChIP-Seq GSE39860 Homer ARNTL +bmyb.motif BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer NHAACBGYYV BMYB HTH canonical Hela BMYB ChIP-Seq GSE27030 Homer MYBL2 +boris.motif BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer CNNBRGCGCCCCCTGSTGGC BORIS Zf canonical K562 CTCFL ChIP-Seq GSE32465 Homer CTCFL +brachyury.motif Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer ANTTMRCASBNNNGTGYKAAN Brachyury T-box canonical Mesoendoderm Brachyury ChIP-exo GSE54963 Homer T +brn1.motif Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer TATGCWAATBAV Brn1 POU,Homeobox canonical NPC Brn1 ChIP-Seq GSE35496 Homer POU3F3 +brn2.motif Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATATTC Brn2 POU,Homeobox canonical NPC Brn2 ChIP-Seq GSE35496 Homer POU3F2 +bzip-irf.motif bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer NAGTTTCABTHTGACTNW bZIP:IRF bZIP,IRF canonical Th17 BatF ChIP-Seq GSE39756 Homer +cdx2.motif Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer GTCATAAAAN Cdx2 Homeobox canonical mES Cdx2 ChIP-Seq GSE14586 Homer CDX2 +cdx4.motif CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer NGYCATAAAWCH CDX4 Homeobox canonical ZebrafishEmbryos Cdx4.Myc ChIP-Seq GSE48254 Homer CDX4 +cebp-ap1.motif CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer NATGTTGCAA CEBP:AP1 bZIP canonical ThioMac CEBPb ChIP-Seq GSE21512 Homer +cebp-cebp.motif CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer NTNATGCAAYMNNHTGMAAY CEBP:CEBP bZIP canonical MEF Chop ChIP-Seq GSE35681 Homer +cebp.motif CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer ATTGCGCAAC CEBP bZIP canonical ThioMac CEBPb ChIP-Seq GSE21512 Homer CEBPB +chop.motif Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer ATTGCATCAT Chop bZIP canonical MEF Chop ChIP-Seq GSE35681 Homer DDIT3 +chr.motif CHR(?)/Hela-CellCycle-Expression/Homer CGGTTTCAAA CHR ? canonical Hela CellCycle Expression NA Homer +clock.motif CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer GHCACGTG CLOCK bHLH canonical Liver Clock ChIP-Seq GSE39860 Homer CLOCK +cMyc.lncap.motif c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer NCCACGTG c-Myc bHLH canonical LNCAP cMyc ChIP-Seq Unpublished Homer +cmyc.motif c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer GNCCACGTGG c-Myc bHLH canonical mES cMyc ChIP-Seq GSE11431 Homer MYC +couptf2.motif COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer AGRGGTCA COUP-TFII NR canonical Artia Nr2f2 ChIP-Seq GSE46497 Homer NR2F2 +cre.motif CRE(bZIP)/Promoter/Homer CGGTGACGTCAC CRE bZIP canonical NA NA Promoter Enrichment NA Homer CREB1 +crx.motif CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer GCTAATCC CRX Homeobox canonical Retina Crx ChIP-Seq GSE20012 Homer CRX +ctcf.motif CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer ATAGTGCCACCTGGTGGCCA CTCF Zf canonical CD4+ CTCF ChIP-Seq Barski_et_al. Homer CTCF +ctcf-mys.motif CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer TGCAGTTCCAANAGTGGCCA CTCF-SatelliteElement Zf? canonical CD4+ CTCF ChIP-Seq Barski_et_al. Homer +cux2.motif Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer HNRAATCAAT Cux2 Homeobox canonical Liver Cux2 ChIP-Seq GSE35985 Homer CUX2 +dmc1.motif Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer ACTYKNATTCGTGNTACTTC Mouse_Recombination_Hotspot Zf canonical Testis DMC1 ChIP-Seq GSE24438 Homer DMC1 +dmrt1.motif DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer TWGHWACAWTGTWDC DMRT1 DM canonical Testis DMRT1 ChIP-Seq GSE64892 Homer DMRT1 +dmrt6.motif DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer YDGHTACAWTGTADC DMRT6 DM canonical Testis DMRT6 ChIP-Seq GSE60440 Homer +dr0.motif RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer AGGTCAAGGTCA RAR:RXR NR DR5 ES RAR ChIP-Seq GSE56893 Homer +dr5.motif RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer RGGTCADNNAGAGGTCAV RAR:RXR NR DR5 ES RAR ChIP-Seq GSE56893 Homer +e2a.motif E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer ANACAGCTGC E2A bHLH canonical proBcell E2A ChIP-Seq GSE21978 Homer TCF3 +e2f1.motif E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer CWGGCGGGAA E2F1 E2F canonical Hela E2F1 ChIP-Seq GSE22478 Homer E2F1 +e2f4.motif E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer GGCGGGAAAH E2F4 E2F canonical K562 E2F4 ChIP-Seq GSE31477 Homer E2F4 +e2f6.motif E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer GGCGGGAARN E2F6 E2F canonical Hela E2F6 ChIP-Seq GSE31477 Homer E2F6 +e2f7.motif E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer VDTTTCCCGCCA E2F7 E2F canonical Hela E2F7 ChIP-Seq GSE32673 Homer E2F7 +e2f.motif E2F(E2F)/Hela-CellCycle-Expression/Homer TTCGCGCGAAAA E2F E2F canonical Hela CellCycle Expression NA Homer +e47.motif E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer NNCACCTGCN E2A bHLH near_PU.1 Bcell PU.1 ChIP-Seq GSE21512 Homer +ebf.motif EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer GGTCCCTAGGGA EBF EBF canonical proBcell EBF ChIP-Seq GSE21978 Homer EBF1 +ebf-old.motif EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer GTCCCCAGGGGA EBF1 EBF canonical Near E2A ChIP-Seq GSE21512 Homer +ebna1.motif EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer GGYAGCAYDTGCTDCCCNNN EBNA1 EBV-virus canonical Raji EBNA1 ChIP-Seq GSE30709 Homer +ebox.motif E-box(bHLH)/Promoter/Homer CCGGTCACGTGA E-box bHLH canonical NA NA Promoter Enrichment NA Homer +egr1.motif Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer TGCGTGGGYG Egr1 Zf canonical K562 Egr1 ChIP-Seq GSE32465 Homer EGR1 +egr2.motif Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer NGCGTGGGCGGR Egr2 Zf canonical Thymocytes Egr2 ChIP-Seq GSE34254 Homer EGR2 +ehf.motif EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer AVCAGGAAGT EHF ETS canonical LoVo EHF ChIP-Seq GSE49402 Homer EHF +eklf.motif EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer NTGGGTGTGGCC EKLF Zf canonical Erythrocyte Klf1 ChIP-Seq GSE20478 Homer KLF1 +elf1.motif ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer AACCGGAAGT ELF1 ETS canonical Jurkat ELF1 ChIP-Seq SRA014231 Homer ELF1 +elf5.motif ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer ACVAGGAAGT ELF5 ETS canonical T47D ELF5 ChIP-Seq GSE30407 Homer ELF5 +elk1.motif Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer HACTTCCGGY Elk1 ETS canonical Hela Elk1 ChIP-Seq GSE31477 Homer ELK1 +elk4.motif Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer NRYTTCCGGY Elk4 ETS canonical Hela Elk4 ChIP-Seq GSE31477 Homer ELK4 +eomes.motif Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer ATTAACACCT Eomes T-box canonical H9 Eomes ChIP-Seq GSE26097 Homer EOMES +ere.motif ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer AAGGTCACNGTGACC ERE NR IR3 MCF7 ERa ChIP-Seq Unpublished Homer ESR1 +erg.motif ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer ACAGGAAGTG ERG ETS canonical VCaP ERG ChIP-Seq GSE14097 Homer ERG +erra.motif Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer CAAAGGTCAG Erra NR canonical HepG2 Erra ChIP-Seq GSE31477 Homer ESRRA +es.motif Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer CACAGCAGGGGG Unknown-ESC-element ? canonical mES Nanog ChIP-Seq GSE11724 Homer +esrrb.motif Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer GTGACCTTGA Esrrb NR canonical mES Esrrb ChIP-Seq GSE11431 Homer ESRRB +ets1.motif ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer ACAGGAAGTG ETS1 ETS canonical Jurkat ETS1 ChIP-Seq GSE17954 Homer ETS1 +ets-distal.motif Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer AACAGGAAGT Ets1-distal ETS canonical CD4+ PolII ChIP-Seq Barski_et_al. Homer +ets-ebox.motif ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer AGGAAACAGCTG ETS:E-box ETS,bHLH canonical HPC7 Scl ChIP-Seq GSE22178 Homer +ets.motif ETS(ETS)/Promoter/Homer AACCGGAAGT ETS ETS canonical NA NA Promoter Enrichment NA Homer +ets-runx.motif ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer ACAGGATGTGGT ETS:RUNX ETS,Runt canonical Jurkat RUNX1 ChIP-Seq GSE17954 Homer +etv1.motif ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer AACCGGAAGT ETV1 ETS canonical GIST48 ETV1 ChIP-Seq GSE22441 Homer ETV1 +etv2.motif Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) NNAYTTCCTGHN Etv2 ETS canonical ES ER71 ChIP-Seq GSE59402 Homer(0.967) ETV2 +ews-erg.motif EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer ATTTCCTGTN EWS:ERG-fusion ETS canonical CADO_ES1 EWS:ERG ChIP-Seq SRA014231 Homer +ews-fli1.motif EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer AACAGGAAAT EWS:FLI1-fusion ETS canonical SK_N_MC EWS:FLI1 ChIP-Seq SRA014231 Homer +fli.motif Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer NRYTTCCGGH Fli1 ETS canonical CD8 FLI ChIP-Seq GSE20898 Homer FLI1 +fosl2.motif Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer NATGASTCABNN Fosl2 bZIP canonical 3T3L1 Fosl2 ChIP-Seq GSE56872 Homer FOXL2 +foxa1.lncap.motif FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer AAAGTAAACA FOXA1 Forkhead canonical LNCAP FOXA1 ChIP-Seq GSE27824 Homer +foxa1.mcf7.motif FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer AAAGTAAACA FOXA1 Forkhead canonical MCF7 FOXA1 ChIP-Seq GSE26831 Homer FOXA1 +foxa2.motif Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer CTTGTTTACATA Foxa2 Forkhead canonical Liver Foxa2 ChIP-Seq GSE25694 Homer FOXA2 +fox-ebox.motif Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer NNNVCTGWGYAAACASN Fox:Ebox Forkhead,bHLH canonical Panc1 Foxa2 ChIP-Seq GSE47459 Homer +foxh1.motif Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer NNTGTGGATTSS Foxh1 Forkhead canonical hESC FOXH1 ChIP-Seq GSE29422 Homer FOXH1 +foxk2.motif FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer SCHTGTTTACAT FOXK2 Forkhead canonical U2OS FOXK2 ChIP-Seq E-MTAB-2204 Homer FOXK2 +foxl2.motif FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer WWTRTAAACAVG FoxL2 Forkhead canonical Ovary FoxL2 ChIP-Seq GSE60858 Homer FOXL2 +foxm1.motif FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer TRTTTACTTW FOXM1 Forkhead canonical MCF7 FOXM1 ChIP-Seq GSE72977 Homer FOXM1 +foxo1.motif Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer CTGTTTAC Foxo1 Forkhead canonical RAW Foxo1 ChIP-Seq Fan_et_al. Homer FOXO1 +foxo3.motif Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer DGTAAACA Foxo3 Forkhead canonical U2OS Foxo3 ChIP-Seq E-MTAB-2701 Homer FOXO3 +foxp1.motif FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer NYYTGTTTACHN FOXP1 Forkhead canonical H9 FOXP1 ChIP-Seq GSE31006 Homer FOXP1 +fra1.motif Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer NNATGASTCATH Fra1 bZIP canonical BT549 Fra1 ChIP-Seq GSE46166 Homer FOSL1 +fra2.motif Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer GGATGACTCATC Fra2 bZIP canonical Striatum Fra2 ChIP-Seq GSE43429 Homer +fxr.motif FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer AGGTCANTGACCTN FXR NR IR1 Liver FXR ChIP-Seq Chong_et_al. Homer NR1H4 +gabp.motif GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer AACCGGAAGT GABPA ETS canonical Jurkat GABPa ChIP-Seq GSE17954 Homer GABPA +gata2.motif Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer NCCTTATCTC Gata2 Zf canonical K562 GATA2 ChIP-Seq GSE18829 Homer GATA2 +gata3.dr4.motif GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATGKDGAGATAAG GATA3 Zf DR4 iTreg Gata3 ChIP-Seq GSE20898 Homer +gata3.dr8.motif GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATSTNDNNDSAGATAASN GATA3 Zf DR8 iTreg Gata3 ChIP-Seq GSE20898 Homer +gata3.ir3.motif GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NNNNNBAGATAWYATCTVHN GATA Zf IR3 iTreg Gata3 ChIP-Seq GSE20898 Homer +gata3.ir4.motif GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NAGATWNBNATCTNN GATA Zf IR4 iTreg Gata3 ChIP-Seq GSE20898 Homer +gata3.motif GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATAASR GATA3 Zf canonical iTreg Gata3 ChIP-Seq GSE20898 Homer GATA3 +gata4.motif Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer NBWGATAAGR Gata4 Zf canonical Heart Gata4 ChIP-Seq GSE35151 Homer GATA4 +gata6.motif Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer YCTTATCTBN Gata6 Zf canonical HUG1N GATA6 ChIP-Seq GSE51936 Homer GATA6 +gata.motif Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer CAGATAAGGN Gata1 Zf canonical K562 GATA1 ChIP-Seq GSE18829 Homer +gata-scl.motif GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer CGGCTGCNGNNNNCAGATAA GATA:SCL Zf,bHLH canonical Ter119 SCL ChIP-Seq GSE18720 Homer +gfi1b.motif Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer AAATCACTGC Gfi1b Zf canonical HPC7 Gfi1b ChIP-Seq GSE22178 Homer GFI1B +gfx.motif GFX(?)/Promoter/Homer ATTCTCGCGAGA GFX ? canonical NA NA Promoter Enrichment NA Homer +gfy.motif GFY(?)/Promoter/Homer ACTACAATTCCC GFY ? canonical NA NA Promoter Enrichment NA Homer +gfy-staf.motif GFY-Staf(?,Zf)/Promoter/Homer AACTACAATTCCCAGAATGC GFY-Staf ?,Zf canonical NA NA Promoter Enrichment NA Homer +gli.motif GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer CGTGGGTGGTCC GLI3 Zf canonical Limb GLI3 ChIP-Chip GSE11077 Homer GLI3 +gre.motif GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer NAGAACAGNCTGTTCT GRE NR IR3 A549 GR ChIP-Seq GSE32465 Homer NR3C1 +gre-raw.motif GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer VAGRACAKWCTGTYC GRE NR IR3 RAW264.7 GRE ChIP-Seq Unpublished Homer +grhl2.motif GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer AAACYKGTTWDACMRGTTTB GRHL2 CP2 canonical HBE GRHL2 ChIP-Seq GSE46194 Homer GRHL2 +gsc.motif GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer RGGATTAR GSC Homeobox canonical FrogEmbryos GSC ChIP-Seq DRA000576 Homer GSC +heb.motif HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer VCAGCTGBNN HEB bHLH canonical mES Heb ChIP-Seq GSE53233 Homer +hif1a.motif HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer TACGTGCV HIF-1a bHLH canonical MCF7 HIF1a ChIP-Seq GSE28352 Homer HIF1A +hif1b.motif HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer RTACGTGC HIF-1b HLH canonical T47D HIF1b ChIP-Seq GSE59937 Homer +hif2a.motif HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer GCACGTACCC HIF2a bHLH canonical 785_O HIF2a ChIP-Seq GSE34871 Homer EPAS1 +hnf1.motif Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer GGTTAAACATTAAC Hnf1 Homeobox canonical Liver Foxa2 Chip-Seq GSE25694 Homer HNF1A +hnf4.motif HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer CAGAGGNCAAAGTCCA HNF4a NR DR1 HepG2 HNF4a ChIP-Seq GSE25021 Homer HNF4A +hnf6.motif HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer NTATYGATCH HNF6 Homeobox canonical Liver Hnf6 ChIP-Seq ERP000394 Homer ONECUT1 +hoxa2.motif HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer GYCATCMATCAT HOXA2 Homeobox canonical mES Hoxa2 ChIP-Seq Donaldson_et_al. Homer HOXA2 +hoxa9.motif HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer GGCCATAAATCA HOXA9 Homeobox canonical HSC Hoxa9 ChIP-Seq GSE33509 Homer HOXA9 +hoxb13.motif HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer TTTTATKRGG HOXB13 Homeobox canonical ProstateTumor HOXB13 ChIP-Seq GSE56288 Homer HOXB13 +hoxb4.motif Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer TGATTRATGGCY Hoxb4 Homeobox canonical ES Hoxb4 ChIP-Seq GSE34014 Homer HOXB4 +hoxc9.motif Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer GGCCATAAATCA Hoxc9 Homeobox canonical Ainv15 Hoxc9 ChIP-Seq GSE21812 Homer HOXC9 +hoxd13.motif HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer NCYAATAAAA HOXD13 Homeobox canonical Chicken Hoxd13 ChIP-Seq GSE38910 Homer HOXD13 +hsf1.motif HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer NNTTCTGGAANNTTCTAGAA HRE HSF canonical HepG2 HSF1 ChIP-Seq GSE31477 Homer HSF1 +hsf.motif HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer TTCTAGAABNTTCTA HRE HSF canonical Striatum HSF1 ChIP-Seq GSE38000 Homer +irf1.motif IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer GAAAGTGAAAGT IRF1 IRF canonical PBMC IRF1 ChIP-Seq GSE43036 Homer IRF1 +irf2.motif IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer GAAASYGAAASY IRF2 IRF canonical Erythroblas IRF2 ChIP-Seq GSE36985 Homer IRF2 +irf4.motif IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer ACTGAAACCA IRF4 IRF canonical GM12878 IRF4 ChIP-Seq GSE32465 Homer IRF4 +isl1.motif Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer CTAATKGV Isl1 Homeobox canonical Neuron Isl1 ChIP-Seq GSE31456 Homer ISL1 +isre.motif ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer AGTTTCAGTTTC ISRE IRF canonical ThioMac LPS Expression GSE23622 Homer +jun-ap1.motif Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer GATGACTCATCN Jun-AP1 bZIP canonical K562 cJun ChIP-Seq GSE31477 Homer JUN +jun-cre.motif c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer ATGACGTCATCC c-Jun-CRE bZIP canonical K562 cJun ChIP-Seq GSE31477 Homer +jund.motif JunD(bZIP)/K562-JunD-ChIP-Seq/Homer ATGACGTCATCN JunD bZIP canonical K562 JunD ChIP-Seq NA Homer JUND +klf10.motif KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer GGGGGTGTGTCC KLF10 Zf canonical HEK293 KLF10.GFP ChIP-Seq GSE58341 Homer KLF10 +klf14.motif KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer RGKGGGCGKGGC KLF14 Zf canonical HEK293 KLF14.GFP ChIP-Seq GSE58341 Homer KLF14 +klf3.motif KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer NRGCCCCRCCCHBNN KLF3 Zf canonical MEF Klf3 ChIP-Seq GSE44748 Homer KLF3 +klf4.motif Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer GCCACACCCA Klf4 Zf canonical mES Klf4 ChIP-Seq GSE11431 Homer KLF4 +klf5.motif KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer DGGGYGKGGC KLF5 Zf canonical LoVo KLF5 ChIP-Seq GSE49402 Homer KLF5 +klf9.motif Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer GCCACRCCCACY Klf9 Zf canonical GBM Klf9 ChIP-Seq GSE62211 Homer KLF9 +lhx1.motif Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer NNYTAATTAR Lhx1 Homeobox canonical EmbryoCarcinoma Lhx1 ChIP-Seq GSE70957 Homer LHX1 +lhx2.motif Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer TAATTAGN Lhx2 Homeobox canonical HFSC Lhx2 ChIP-Seq GSE48068 Homer LHX2 +lhx3.motif Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer ADBTAATTAR Lhx3 Homeobox canonical Neuron Lhx3 ChIP-Seq GSE31456 Homer LHX3 +limb.motif Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer GGCAATTAAA Unknown Homeobox canonical Limb p300 ChIP-Seq NA Homer +lrh1.motif Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer BTCAAGGTCA Nr5a2 NR canonical Pancreas LRH1 ChIP-Seq GSE34295 Homer NR5A2 +lxre.motif LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer GGGTTACTANAGGTCA LXRE NR DR4 RAW LXRb.biotin ChIP-Seq GSE21512 Homer NR1H2 +mafa.motif MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer TGCTGACTCA MafA bZIP canonical Islet MafA ChIP-Seq GSE30298 Homer MAFA +mafF.motif MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer HWWGTCAGCAWWTTT MafF bZIP canonical HepG2 MafF ChIP-Seq GSE31477 Homer MAFF +mafk.motif MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer GCTGASTCAGCA MafK bZIP canonical C2C12 MafK ChIP-Seq GSE36030 Homer MAFK +max.motif Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer ACCACGTGGTCN Max bHLH canonical K562 Max ChIP-Seq GSE31477 Homer MAX +maz.motif Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer GGGGGGGG Maz Zf canonical HepG2 Maz ChIP-Seq GSE31477 Homer MAZ +mef2a.motif Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer CCAAAAATAG Mef2a MADS canonical HL1 Mef2a.biotin ChIP-Seq GSE21529 Homer MEF2A +mef2b.motif Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer GCTATTTTTGGM Mef2b MADS canonical HEK293 Mef2b.V5 ChIP-Seq GSE67450 Homer MEF2B +mef2c.motif Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer DCYAAAAATAGM Mef2c MADS canonical GM12878 Mef2c ChIP-Seq GSE32465 Homer MEF2C +mef2d.motif Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer GCTATTTTTAGC Mef2d MADS canonical Retina Mef2d ChIP-Seq GSE61391 Homer MEF2D +meis1.motif Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer VGCTGWCAVB Meis1 Homeobox canonical MastCells Meis1 ChIP-Seq GSE48085 Homer MEIS1 +mitf.motif MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer RTCATGTGAC MITF bHLH canonical MastCells MITF ChIP-Seq GSE48085 Homer MITF +myba.motif AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer TGGCAGTTGG AMYB HTH canonical Testes AMYB ChIP-Seq GSE44588 Homer MYBL1 +myb.motif MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer GGCVGTTR MYB HTH canonical ERMYB Myb ChIPSeq GSE22095 Homer MYB +myf5.motif Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer BAACAGCTGT Myf5 bHLH canonical GM Myf5 ChIP-Seq GSE24852 Homer MYF5 +myod.motif MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer AGCAGCTGCTGC MyoD bHLH canonical Myotube MyoD ChIP-Seq GSE21614 Homer MYOD1 +myog.motif MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer AACAGCTG MyoG bHLH canonical C2C12 MyoG ChIP-Seq GSE36024 Homer MYOG +nanog.motif Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer GGCCATTAAC Nanog Homeobox canonical mES Nanog ChIP-Seq GSE11724 Homer NANOG +neurod1.motif NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer GCCATCTGTT NeuroD1 bHLH canonical Islet NeuroD1 ChIP-Seq GSE30298 Homer NEUROD1 +nf1-fox.motif NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer NNTGTTTATTTTGGCA NF1:FOXA1 CTF,Forkhead canonical LNCAP FOXA1 ChIP-Seq GSE27824 Homer +nf1-half.motif NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer TTGCCAAG NF1-halfsite CTF canonical LNCaP NF1 ChIP-Seq Unpublished Homer +nf1.motif NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer CTTGGCACNGTGCCAA NF1 CTF canonical LNCAP NF1 ChIP-Seq Unpublished Homer NFIB +nfat-ap1.motif NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer GAATGGAAAAAATGAGTCAT NFAT:AP1 RHD,bZIP canonical Jurkat NFATC1 ChIP-Seq Jolma_et_al. Homer +nfatc1.motif NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer ATTTTCCATT NFAT RHD canonical Jurkat NFATC1 ChIP-Seq Jolma_et_al. Homer NFATC1 +nfe2.motif NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer GATGACTCAGCA NF-E2 bZIP canonical K562 NFE2 ChIP-Seq GSE31477 Homer NFE2 +nfkb.motif NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer GGAAATTCCC NFkB-p65-Rel RHD canonical ThioMac LPS Expression GSE23622 Homer +nfy.motif NFY(CCAAT)/Promoter/Homer AGCCAATCGG NFY CCAAT canonical NA NA Promoter Enrichment NA Homer NFYA +nkx2.1.motif Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer RSCACTYRAG Nkx2.1 Homeobox canonical LungAC Nkx2.1 ChIP-Seq GSE43252 Homer NKX2-1 +nkx2.2.motif Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer BTBRAGTGSN Nkx2.2 Homeobox canonical NPC Nkx2.2 ChIP-Seq GSE61673 Homer NKX2-2 +nkx2.5.motif Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer AASCACTCAA Nkx2.5 Homeobox canonical HL1 Nkx2.5.biotin ChIP-Seq GSE21529 Homer NKX2-5 +nkx3.1.motif Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer AAGCACTTAA Nkx3.1 Homeobox canonical LNCaP Nkx3.1 ChIP-Seq GSE28264 Homer NKX3-1 +nkx6.1.motif Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer GKTAATGR Nkx6.1 Homeobox canonical Islet Nkx6.1 ChIP-Seq GSE40975 Homer NKX6-1 +nmyc.motif n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer GNCCACGTGG n-Myc bHLH canonical mES nMyc ChIP-Seq GSE11431 Homer MYCN +npas2.motif NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer KCCACGTGAC NPAS2 bHLH canonical Liver NPAS2 ChIP-Seq GSE39860 Homer NPAS2 +npas.motif NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer NVCACGTG NPAS bHLH canonical Liver NPAS ChIP-Seq GSE39860 Homer +nr5a2.motif Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer TTCAAGGTCA Nr5a2 NR canonical mES Nr5a2 ChIP-Seq GSE19019 Homer NR5A2 +nrf1.motif NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer CTGCGCATGCGC NRF1 NRF canonical MCF7 NRF1 ChIP-Seq Unpublished Homer NRF1 +nrf2.motif Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer HTGCTGAGTCAT Nrf2 bZIP canonical Lymphoblast Nrf2 ChIP-Seq GSE37589 Homer NFE2L2 +nrf.motif NRF(NRF)/Promoter/Homer GTGCGCATGCGC NRF NRF canonical NA NA Promoter Enrichment NA Homer +nur77.motif Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer TGACCTTTNCNT Nur77 NR canonical K562 NR4A1 ChIP-Seq GSE31363 Homer NR4A1 +oct2.motif Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer ATATGCAAAT Oct2 POU,Homeobox canonical Bcell Oct2 ChIP-Seq GSE21512 Homer POU2F2 +oct4.motif Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAA Oct4 POU,Homeobox canonical mES Oct4 ChIP-Seq GSE11431 Homer POU5F1 +oct4-sox17.motif Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer CCATTGTATGCAAAT Oct4:Sox17 POU,Homeobox,HMG canonical F9 Sox17 ChIP-Seq GSE44553 Homer +oct4-sox2.motif OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAACAATG OCT4-SOX2-TCF-NANOG POU,Homeobox,HMG canonical mES Oct4 ChIP-Seq GSE11431 Homer +oct6.motif Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer WATGCAAATGAG Oct6 POU,Homeobox canonical NPC Pou3f1 ChIP-Seq GSE35496 Homer POU3F1 +oct.ir1.motif OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATWATTCATGA OCT:OCT POU,Homeobox,IR1 canonical NPC Brn2 ChIP-Seq GSE35496 Homer +oct.ir.motif OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer ATGAATATTCATGAG OCT:OCT POU,Homeobox canonical NPC Brn1 ChIP-Seq GSE35496 Homer +olig2.motif Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer RCCATMTGTT Olig2 bHLH canonical Neuron Olig2 ChIP-Seq GSE30882 Homer OLIG2 +otx2.motif Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer NYTAATCCYB Otx2 Homeobox canonical EpiLC Otx2 ChIP-Seq GSE56098 Homer OTX2 +p50.motif NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer GGGGGAATCCCC NFkB-p50,p52 RHD canonical Monocyte p50 ChIP-Chip Schreiber_et_al. Homer NFKB1 +p53.motif p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer AACATGCCCAGACATGCCCN p53 p53 canonical Saos p53 ChIP-Seq GSE15780 Homer TP53 +p53-myc.motif p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer ACATGCCCGGGCAT p53 p53 canonical mES cMyc ChIP-Seq GSE11431 Homer +p63.motif p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer NNNGCATGTCCNGACATGCC p63 p53 canonical Keratinocyte p63 ChIP-Seq GSE17611 Homer TP63 +p65.motif NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer AGGGGATTTCCC NFkB-p65 RHD canonical GM12787 p65 ChIP-Seq GSE19485 Homer RELA +pax3-fkhr.motif PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer ACCGTGACTAATTNN PAX3:FKHR-fusion Paired,Homeobox canonical Rh4 PAX3:FKHR ChIP-Seq GSE19063 Homer +pax5.motif PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GCAGCCAAGCGTGACC PAX5 Paired,Homeobox canonical GM12878 PAX5 ChIP-Seq GSE32465 Homer PAX5 +pax5-short.motif PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GTCACGCTCNCTGA PAX5 Paired,Homeobox condensed GM12878 PAX5 ChIP-Seq GSE32465 Homer +pax6.motif PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer NGTGTTCAVTSAAGCGKAAA PAX6 Paired,Homeobox canonical Forebrain Pax6 ChIP-Seq GSE66961 Homer PAX6 +pax7-longest.motif Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer NTAATTDGCYAATTANNWWD Pax7 Paired,Homeobox longest Myoblast Pax7 ChIP-Seq GSE25064 Homer +pax7-long.motif Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCHGATTAC Pax7 Paired,Homeobox long Myoblast Pax7 ChIP-Seq GSE25064 Homer +pax7.motif Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCAATTA Pax7 Paired,Homeobox canonical Myoblast Pax7 ChIP-Seq GSE25064 Homer PAX7 +pax8.motif Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer GTCATGCHTGRCTGS Pax8 Paired,Homeobox canonical Thyroid Pax8 ChIP-Seq GSE26938 Homer PAX8 +pbx1.motif PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer GSCTGTCACTCA PBX1 Homeobox canonical MCF7 PBX1 ChIP-Seq GSE28007 Homer PBX1 +pbx3.motif Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer CCTGTCAATCAN Pbx3 Homeobox canonical GM12878 PBX3 ChIP-Seq GSE32465 Homer PBX3 +pdx1.motif Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer TCATCAATCA Pdx1 Homeobox canonical Islet Pdx1 ChIP-Seq SRA008281 Homer PDX1 +pgr.motif PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer AAGAACATWHTGTTC PGR NR canonical EndoStromal PGR ChIP-Seq GSE69539 Homer PGR +phox2a.motif Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer YTAATYNRATTA Phox2a Homeobox canonical Neuron Phox2a ChIP-Seq GSE31456 Homer PHOX2A +pit1-long.motif Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGCATAATTCA Pit1+1bp Homeobox canonical GCrat Pit1 ChIP-Seq GSE58009 Homer +pit1.motif Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGMATATDC Pit1 Homeobox canonical GCrat Pit1 ChIP-Seq GSE58009 Homer POU1F1 +pitx1-ebox.motif Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer YTAATTRAWWCCAGATGT Pitx1:Ebox Homeobox,bHLH canonical Hindlimb Pitx1 ChIP-Seq GSE41591 Homer +pitx1.motif Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer TAATCCCN Pitx1 Homeobox canonical Chicken Pitx1 ChIP-Seq GSE38910 Homer PITX1 +pknox1.motif Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer SCTGTCAVTCAV Pknox1 Homeobox canonical ES Prep1 ChIP-Seq GSE63282 Homer PKNOX1 +pparg.motif PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer TGACCTTTGCCCCA PPARE NR DR1 3T3L1 Pparg ChIP-Seq GSE13511 Homer PPARG +prdm14.motif PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer AGGTCTCTAACC PRDM14 Zf canonical H1 PRDM14 ChIP-Seq GSE22767 Homer PRDM14 +prdm1.motif PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer ACTTTCACTTTC PRDM1 Zf canonical Hela PRDM1 ChIP-Seq GSE31477 Homer PRDM1 +prdm9.motif PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer ADGGYAGYAGCATCT PRDM9 Zf canonical Testis DMC1 ChIP-Seq GSE35498 Homer PRDM9 +pr.motif PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer VAGRACAKNCTGTBC PR NR canonical T47D PR ChIP-Seq GSE31130 Homer +ptf1a.motif Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer ACAGCTGTTN Ptf1a bHLH canonical Panc1 Ptf1a ChIP-Seq GSE47459 Homer PTF1A +pu1-irf8.motif PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer GGAAGTGAAAST PU.1:IRF8 ETS:IRF canonical pDC Irf8 ChIP-Seq GSE66899 Homer IRF8 +pu1-irf.motif PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer CGGAAGTGAAAC PU.1-IRF ETS:IRF canonical Bcell PU.1 ChIP-Seq GSE21512 Homer +pu1.motif PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer AGAGGAAGTG PU.1 ETS canonical ThioMac PU.1 ChIP-Seq GSE21512 Homer SPI1 +rarg.motif RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer AGGTCAAGGTCA RARg NR canonical ES RARg ChIP-Seq GSE30538 Homer RARG +rbpj1-ebox.motif RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer GGGRAARRGRMCAGMTG RBPJ:Ebox ?,bHLH canonical Panc1 Rbpj1 ChIP-Seq GSE47459 Homer +rbpj1.motif Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer HTTTCCCASG Rbpj1 ? canonical Panc1 Rbpj1 ChIP-Seq GSE47459 Homer RBPJ +rest.motif REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer GGAGCTGTCCATGGTGCTGA REST-NRSF Zf canonical Jurkat NRSF ChIP-Seq NA Homer REST +reverb.motif Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer GTAGGTCACTGGGTCA Reverb NR DR2 RAW Reverba.biotin ChIP-Seq GSE45914 Homer NR1D1 +rfx1.motif Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer GGTTGCCATGGCAA Rfx1 HTH canonical NPC H3K4me1 ChIP-Seq GSE16256 Homer RFX1 +rfx2.motif Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer GTTGCCATGGCAACM Rfx2 HTH canonical LoVo RFX2 ChIP-Seq GSE49402 Homer RFX2 +rfx3.motif RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer CGGTTGCCATGGCAAC RFX HTH canonical K562 RFX3 ChIP-Seq SRA012198 Homer RFX3 +rfx5.motif Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer SCCTAGCAACAG Rfx5 HTH canonical GM12878 Rfx5 ChIP-Seq GSE31477 Homer RFX5 +ronin.motif Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer RACTACAACTCCCAGVAKGC Ronin THAP canonical ES Thap11 ChIP-Seq GSE51522 Homer THAP11 +rorc.motif RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA RORgt NR canonical EL4 RORgt.Flag ChIP-Seq GSE56019 Homer RORC +runx1m.motif RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer CAAACCACAG RUNX Runt canonical HPC7 Runx1 ChIP-Seq GSE22178 Homer +runx1.motif RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer AAACCACAAA RUNX1 Runt canonical Jurkat RUNX1 ChIP-Seq GSE29180 Homer RUNX1 +runx2.motif RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer NWAACCACADNN RUNX2 Runt canonical PCa RUNX2 ChIP-Seq GSE33889 Homer RUNX2 +runx.motif RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer GCTGTGGTTT RUNX-AML Runt canonical CD4+ PolII ChIP-Seq Barski_et_al. Homer +rxr.motif RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer TAGGGCAAAGGTCA RXR NR DR1 3T3L1 RXR ChIP-Seq GSE13511 Homer RXRA +scl.motif SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer ANCAGCTG SCL bHLH canonical HPC7 Scl ChIP-Seq GSE13511 Homer TAL1 +sf1.motif SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer CAAGGHCANV SF1 NR canonical H295R Nr5a1 ChIP-Seq GSE44220 Homer NR5A1 +six1.motif Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer GKVTCADRTTWC Six1 Homeobox canonical Myoblast Six1 ChIP-Chip GSE20150 Homer SIX1 +six2.motif Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer GWAAYHTGAKMC Six2 Homeobox canonical NephronProgenitor Six2 ChIP-Seq GSE39837 Homer SIX2 +smad2.motif Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer CTGTCTGG Smad2 MAD canonical ES SMAD2 ChIP-Seq GSE29422 Homer SMAD2 +smad3.motif Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer TWGTCTGV Smad3 MAD canonical NPC Smad3 ChIP-Seq GSE36673 Homer SMAD3 +smad4.motif Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer VBSYGTCTGG Smad4 MAD canonical ESC SMAD4 ChIP-Seq GSE29422 Homer SMAD4 +sox10.motif Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer CCWTTGTYYB Sox10 HMG canonical SciaticNerve Sox3 ChIP-Seq GSE35132 Homer SOX10 +sox15.motif Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer RAACAATGGN Sox15 HMG canonical CPA Sox15 ChIP-Seq GSE62909 Homer SOX15 +sox2.motif Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer CCCATTGTTC Sox2 HMG canonical mES Sox2 ChIP-Seq GSE11431 Homer SOX2 +sox3.motif Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer CCWTTGTY Sox3 HMG canonical NPC Sox3 ChIP-Seq GSE33059 Homer SOX3 +sox4.motif Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer YCTTTGTTCC Sox4 HMG canonical proB Sox4 ChIP-Seq GSE50066 Homer SOX4 +sox6.motif Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer CCATTGTTNY Sox6 HMG canonical Myotubes Sox6 ChIP-Seq GSE32627 Homer SOX6 +sox9.motif Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer AGGVNCCTTTGT Sox9 HMG canonical Limb SOX9 ChIP-Seq GSE73225 Homer SOX9 +sp1.motif Sp1(Zf)/Promoter/Homer GGCCCCGCCCCC Sp1 Zf canonical NA NA Promoter Enrichment NA Homer SP1 +spdef.motif SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer ACATCCTGGT SPDEF ETS canonical VCaP SPDEF ChIP-Seq SRA014231 Homer SPDEF +spib.motif SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer AAAGRGGAAGTG SpiB ETS canonical OCILY3 SPIB ChIP-Seq GSE56857 Homer SPIB +srebp1a.motif Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer ATCACCCCAT Srebp1a bHLH canonical HepG2 Srebp1a ChIP-Seq GSE31477 Homer SREBF1 +srebp2.motif Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer CGGTCACGCCAC Srebp2 bHLH canonical HepG2 Srebp2 ChIP-Seq GSE31477 Homer SREBF2 +srf.motif CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer CCATATATGGNA CArG MADS canonical PUER Srf ChIP-Seq Sullivan_et_al. Homer SRF +staf.motif ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer ATTTCCCAGVAKSCY ZNF143|STAF Zf canonical CUTLL ZNF143 ChIP-Seq GSE29600 Homer ZNF143 +stat1.motif STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer NATTTCCNGGAAAT STAT1 Stat canonical HelaS3 STAT1 ChIP-Seq GSE12782 Homer STAT1 +stat3.il23.motif Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer CNCTTCCNGGAAGN Stat3+il21 Stat canonical CD4 Stat3 ChIP-Seq GSE19198 Homer +stat3.motif Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer CTTCCGGGAA Stat3 Stat canonical mES Stat3 ChIP-Seq GSE11431 Homer STAT3 +stat4.motif STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer NTTTCCAGGAAA STAT4 Stat canonical CD4 Stat4 ChIP-Seq GSE22104 Homer STAT4 +stat5.motif STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer ATTTCTNAGAAA STAT5 Stat canonical mCD4+ Stat5 ChIP-Seq GSE12346 Homer STAT5A +stat6.2.motif STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer TTCCKNAGAA STAT6 Stat canonical Macrophage Stat6 ChIP-Seq GSE38377 Homer +stat6.motif STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer ANTTCTTAAGAA STAT6 Stat canonical CD4 Stat6 ChIP-Seq GSE22104 Homer STAT6 +t1isre.motif T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer ACTTTCGTTTCT T1ISRE IRF canonical ThioMac Ifnb Expression NA Homer +tata.motif TATA-Box(TBP)/Promoter/Homer CCTTTTATAGCC TATA-Box TBP canonical NA NA Promoter Enrichment NA Homer TBP +tbet.motif Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer AGGTGTGAAM Tbet T-box canonical CD8 Tbet ChIP-Seq GSE33802 Homer TBX21 +tbox-smad.motif Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer AGGTGHCAGACA Tbox:Smad T-box,MAD canonical ESCd5 Smad2_3 ChIP-Seq GSE29422 Homer +tbx20.motif Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer GGTGYTGACAGS Tbx20 T-box canonical Heart Tbx20 ChIP-Seq GSE29636 Homer TBX20 +tbx5.motif Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer AGGTGTCA Tbx5 T-box canonical HL1 Tbx5.biotin ChIP-Seq GSE21529 Homer TBX5 +tcf12.motif Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer ACAGCTGCTG Tcf12 bHLH canonical GM12878 Tcf12 ChIP-Seq GSE32465 Homer TCF12 +tcf21.motif Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer NAACAGCTGG Tcf21 bHLH canonical ArterySmoothMuscle Tcf21 ChIP-Seq GSE61369 Homer TCF21 +tcf3.motif Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer ACATCAAAGG Tcf3 HMG canonical mES Tcf3 ChIP-Seq GSE11724 Homer TCF7L1 +tcf4.motif Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer ACATCAAAGGGA Tcf4 HMG canonical Hct116 Tcf4 ChIP-Seq SRA012054 Homer TCF7L2 +tcf7l2.motif TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer ACWTCAAAGG TCFL2 HMG canonical K562 TCF7L2 ChIP-Seq GSE29196 Homer +tcfcp2l1.motif Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer NAAACCGGTTCAAACCGGTT Tcfcp2l1 CP2 canonical mES Tcfcp2l1 ChIP-Seq GSE11431 Homer TFCP2L1 +tead2.motif TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer CCWGGAATGY TEAD2 TEA canonical Py2T Tead2 ChIP-Seq GSE55709 Homer TEAD2 +tead4.motif TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer CCWGGAATGY TEAD4 TEA canonical Tropoblast Tead4 ChIP-Seq GSE37350 Homer TEAD4 +tead.motif TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer NCTGGAATGC TEAD TEA canonical Fibroblast PU.1 ChIP-Seq Unpublished Homer +tgif1.motif Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer YTGWCADY Tgif1 Homeobox canonical mES Tgif1 ChIP-Seq GSE55404 Homer TGIF1 +tgif2.motif Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer TGTCANYT Tgif2 Homeobox canonical mES Tgif2 ChIP-Seq GSE55404 Homer TGIF2 +tlx.motif Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer CTGGCAGGCTGCCA Tlx? NR canonical NPC H3K4me1 ChIP-Seq GSE16256 Homer NR2E1 +tr4.motif TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer GAGGTCAAAGGTCA TR4 NR DR1 Hela TR4 ChIP-Seq GSE24685 Homer NR2C2 +tra.motif THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer GGTCANYTGAGGWCA THRa NR canonical C17.2 THRa ChIP-Seq GSE38347 Homer THRA +trb.motif THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer TRAGGTCA THRb NR canonical Liver NR1A2 ChIP-Seq GSE52613 Homer THRB +usf1.motif USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer GGTCACGTGA USF1 bHLH canonical GM12878 Usf1 ChIP-Seq GSE32465 Homer USF1 +usf2.motif Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer GTCACGTGGT Usf2 bHLH canonical C2C12 Usf2 ChIP-Seq GSE36030 Homer USF2 +vdr.motif VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer NGAGGTCANNGAGTTCANNN VDR NR DR3 GM10855 VDR+vitD ChIP-Seq GSE22484 Homer VDR +xbox.motif X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer GGTTGCCATGGCAA X-box HTH canonical NPC H3K4me1 ChIP-Seq GSE16256 Homer +yy1.motif YY1(Zf)/Promoter/Homer CAAGATGGCGGC YY1 Zf canonical NA NA Promoter Enrichment NA Homer YY1 +zbtb12.motif ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer NGNTCTAGAACCNGV ZBTB12 Zf canonical HEK293 ZBTB12.GFP ChIP-Seq GSE58341 Homer ZBTB12 +zbtb18.motif ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer AACATCTGGA ZBTB18 Zf canonical HEK293 ZBTB18.GFP ChIP-Seq GSE58341 Homer ZBTB18 +zbtb33.motif ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer GGNTCTCGCGAGAAC ZBTB33 Zf canonical GM12878 ZBTB33 ChIP-Seq GSE32465 Homer ZBTB33 +zfp3.motif ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer GGGTTTTGAAGGATGARTAGGAGTT ZFP3 Zf canonical HEK293 ZFP3.GFP ChIP-Seq GSE58341 Homer ZFP3 +zfp809.motif Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer GGGGCTYGKCTGGGA Zfp809 Zf canonical ES Zfp809 ChIP-Seq GSE70799 Homer +zfx.motif ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer AGGCCTGG ZFX Zf canonical mES Zfx ChIP-Seq GSE11431 Homer ZFX +zic.motif Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer CCTGCTGAGH Zic Zf canonical Cerebellum ZIC1.2 ChIP-Seq GSE60731 Homer ZIC1 +znf136.motif ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer YTKGATAHAGTATTCTWGGTNGGCA ZNF136 Zf canonical HEK293 ZNF136.GFP ChIP-Seq GSE58341 Homer ZNF136 +znf165.motif ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer AAGGKGRCGCAGGCA ZNF165 Zf canonical WHIM12 ZNF165 ChIP-Seq GSE65937 Homer ZNF165 +znf16.motif ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer MACCTTCYATGGCTCCCTAKTGCCY ZNF16 Zf canonical HEK293 ZNF16.GFP ChIP-Seq GSE58341 Homer ZNF16 +znf189.motif ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer TGGAACAGMA ZNF189 Zf canonical HEK293 ZNF189.GFP ChIP-Seq GSE58341 Homer ZNF189 +znf263.motif Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer CNGTCCTCCC Znf263 Zf canonical K562 Znf263 ChIP-Seq GSE31477 Homer ZNF263 +znf264.motif ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer RGGGCACTAACY ZNF264 Zf canonical HEK293 ZNF264.GFP ChIP-Seq GSE58341 Homer ZNF264 +znf317.motif ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer GTCWGCTGTYYCTCT ZNF317 Zf canonical HEK293 ZNF317.GFP ChIP-Seq GSE58341 Homer ZNF317 +znf322.motif ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer GAGCCTGGTACTGWGCCTGR ZNF322 Zf canonical HEK293 ZNF322.GFP ChIP-Seq GSE58341 Homer ZNF322 +znf382.motif ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer GNCTGTASTRNTGBCTCHTT ZNF382 Zf canonical HEK293 ZNF382.GFP ChIP-Seq GSE58341 Homer ZNF382 +znf415.motif ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer GRTGMTRGAGCC ZNF415 Zf canonical HEK293 ZNF415.GFP ChIP-Seq GSE58341 Homer ZNF415 +znf416.motif ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer WDNCTGGGCA ZNF416 Zf canonical HEK293 ZNF416.GFP ChIP-Seq GSE58341 Homer ZNF416 +znf41.motif ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer CCTCATGGTGYCYTWYTCCCTTGTG ZNF41 Zf canonical HEK293 ZNF41.GFP ChIP-Seq GSE58341 Homer ZNF41 +znf467.motif ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer TGGGGAAGGGCM ZNF467 Zf canonical HEK293 ZNF467.GFP ChIP-Seq GSE58341 Homer ZNF467 +znf519.motif ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer GAGSCCGAGC ZNF519 Zf canonical HEK293 ZNF519.GFP ChIP-Seq GSE58341 Homer ZNF519 +znf528.motif ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer AGAAATGACTTCCCT ZNF528 Zf canonical HEK293 ZNF528.GFP ChIP-Seq GSE58341 Homer ZNF528 +znf669.motif ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer GARTGGTCATCGCCC ZNF669 Zf canonical HEK293 ZNF669.GFP ChIP-Seq GSE58341 Homer ZNF669 +znf675.motif ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer ARGAGGMCAAAATGW ZNF675 Zf canonical HEK293 ZNF675.GFP ChIP-Seq GSE58341 Homer ZNF675 +znf692.motif ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer GTGGGCCCCA ZNF692 Zf canonical HEK293 ZNF692.GFP ChIP-Seq GSE58341 Homer ZNF692 +znf711.motif ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer AGGCCTAG ZNF711 Zf canonical SHSY5Y ZNF711 ChIP-Seq GSE20673 Homer ZNF711 +zscan22.motif ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer SMCAGTCWGAKGGAGGAGGC ZSCAN22 Zf canonical HEK293 ZSCAN22.GFP ChIP-Seq GSE58341 Homer ZSCAN22