---
DATA:
dir: "/Volumes/GoogleDrive-108722195023672559969/Shared drives/QuantitativeBiology/Datasets"
min_count: 100
append_tissue: True
ML:
model: "rf"
dataset_y: "drug_response"
params_grid:
criterion: ["mse"]
n_estimators: [600] # [400, 600, 800, 1000]
min_samples_split: [5] # [2, 5]
min_samples_leaf: [2] # [1, 2]
max_features: ["sqrt"]
n_jobs: [4]
cv:
n_splits: 5
OUTPUT:
file: "data/ML_phenotype_prediction_drug_with_tissue.csv"