# Core
numpy
pandas
dask[distributed]
networkx
scipy
astropy
# Bioinf
biopython
bioservices
pyfaidx
goatools
obonet
gtfparse
# IO utils
h5py != 3.7.0
lxml >= 4.9.1
gunicorn
six
validators
sqlalchemy
filetype
rarfile
filetype
logzero
tqdm
itsdangerous
ruamel.yaml
# Visualizations
bokeh
matplotlib
# Dash
dash
dash-daq
dash-bootstrap-components
flask>=2.2.5 # not directly required, pinned by Snyk to avoid a vulnerability
setuptools>=65.5.1 # not directly required, pinned by Snyk to avoid a vulnerability