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b/OmicsFold/man/normalise.css.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/MixMC.R |
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\name{normalise.css} |
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\alias{normalise.css} |
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\title{Apply Cumulative Sum Scaling normalisation} |
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\usage{ |
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normalise.css(otu.counts) |
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} |
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\arguments{ |
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\item{otu.counts}{OTU count data frame of size n (sample) x p (OTU).} |
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} |
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\value{ |
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Data frame containing count data normalised cumulatively. |
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} |
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\description{ |
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Alternate Cumulative Sum Scale (CSS) method for normalising count data for |
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inter-sample depth. Relies upon the metagenomeSeq implementation. |
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} |
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\examples{ |
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\dontrun{ |
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normalise.css(otu.count) |
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} |
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} |