|
a |
|
b/OmicsFold/man/map.symbols.entrez.ids.Rd |
|
|
1 |
% Generated by roxygen2: do not edit by hand |
|
|
2 |
% Please edit documentation in R/identifier_mapping.R |
|
|
3 |
\name{map.symbols.entrez.ids} |
|
|
4 |
\alias{map.symbols.entrez.ids} |
|
|
5 |
\title{Map gene symbols to Entrez IDs} |
|
|
6 |
\usage{ |
|
|
7 |
map.symbols.entrez.ids(symbols, organism) |
|
|
8 |
} |
|
|
9 |
\arguments{ |
|
|
10 |
\item{symbols}{List of gene symbols.} |
|
|
11 |
|
|
|
12 |
\item{organism}{The organism the symbols relate to. This can be any of the |
|
|
13 |
supported common names, scientific names or shorthand shown when calling |
|
|
14 |
\code{anRichmentMethods::organismLabels()}.} |
|
|
15 |
} |
|
|
16 |
\value{ |
|
|
17 |
Data frame containing pairs of symbols and Entrez IDs. |
|
|
18 |
} |
|
|
19 |
\description{ |
|
|
20 |
Map a list of symbols to their corresponding Entrez IDs. This wraps the |
|
|
21 |
method from the anRichmentMethods library to convert a list of symbols to |
|
|
22 |
entrez IDs. |
|
|
23 |
} |
|
|
24 |
\examples{ |
|
|
25 |
\dontrun{ |
|
|
26 |
gene.symbols.and.ids <- map.symbols.entrez.ids(gene.symbols, "mouse") |
|
|
27 |
} |
|
|
28 |
} |