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b/OmicsFold/man/get.diablo.top.loadings.with.stability.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/feature_loadings.R |
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\name{get.diablo.top.loadings.with.stability} |
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\alias{get.diablo.top.loadings.with.stability} |
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\title{Get DIABLO top loadings and stabilities} |
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\usage{ |
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get.diablo.top.loadings.with.stability( |
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trained.model, |
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perf.result, |
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block, |
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feature.count = 20 |
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) |
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} |
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\arguments{ |
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\item{trained.model}{A multiomics DIABLO model.} |
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\item{perf.result}{The results from a perf test on the above model.} |
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\item{block}{The name or index of the block to get the data for.} |
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\item{feature.count}{The number of top loadings from each component to |
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include.} |
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} |
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\value{ |
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A dataframe containing the top (by absolute magnitude) factor |
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loadings for each component and selection stability values for those |
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features. |
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} |
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\description{ |
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Get a dataframe showing the top ranked loading factors for a trained mixOmics |
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multi-omics DIABLO model along with selection stability values. Where a |
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feature appears in more than one component, the selection stability value |
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shown is for the lowest numbered component. |
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} |
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\examples{ |
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\dontrun{ |
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get.diablo.top.loadings.with.stability(diablo.model, diablo.perf.result, 'species', 100) |
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} |
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} |