--- a
+++ b/OmicsFold/man/find.feature.associations.Rd
@@ -0,0 +1,29 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/sample_analysis.R
+\name{find.feature.associations}
+\alias{find.feature.associations}
+\title{Extract and plot feature associations in a DIABLO model}
+\usage{
+find.feature.associations(diablo.tuned, block.count)
+}
+\arguments{
+\item{block.count}{Number of blocks used in the model.}
+
+\item{diablo}{Trained mixOmics multi-omics (DIABLO) model.}
+}
+\value{
+Matrix including the association of all selected features across all
+blocks. E.g. for a three block multi-omic model, this will include the top 20
+features from each block, and so return a 60x60 covariance matrix.
+}
+\description{
+Extract feature vs. feature association (mutual information) data for a
+multi-omics mixOmics (DIABLO) model, and plot this as a heatmap. This is the
+same data used to create the circos and network plots, but includes all
+interactions for the top twenty features from each block.
+}
+\examples{
+\dontrun{
+find.feature.associations(diablo.trained.analysis, 3)
+}
+}