--- a/README.md
+++ b/README.md
@@ -1,44 +1,44 @@
-# MultiMAP
-**MultiMAP** is a method for integrating single cell multi-omics. MultiMAP can also be used for batch correction. More detail is available in our [paper](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02565-y).
-
-<p align="center"><img src="docs/MultiMAP_schematic.png" width="900"></p>
-
-
-## Installation
-
-```bash
-pip3 install git+https://github.com/Teichlab/MultiMAP.git
-```
-
-## Usage and Documentation
-
-MultiMAP offers two functions accepting AnnData objects on input:
-  - `MultiMAP.Integration()` expects a list of one AnnData per dataset, with the desired dimensionality reduction precomputed and stored in `.obsm`. This allows for refining the initial dimensionality reduction, e.g. if wishing to use `TFIDF_LSI` for ATAC data and PCA for RNA data.
-  - `MultiMAP.Batch()` expects a single AnnData object with the dataset information stored in an `.obs` column. This allows for convenient integration with minimal preparation if all datasets can be treated with the same dimensionality reduction.
-
-There's also an AnnData-independent `MultiMAP.matrix.MultiMAP()` function which operates directly on dimensionality reduction matrices. This requires precomputing all pairwise dimensionality reductions prior to calling MultiMAP.
-
-A tutorial covering both RNA-ATAC integration and RNA-Seq batch correction use can be found [here](https://nbviewer.jupyter.org/github/Teichlab/MultiMAP/blob/master/examples/tutorial.ipynb).
-
-Documentation of the function parameters can be found on [ReadTheDocs](https://multimap.readthedocs.io/en/latest/).
-
-## Citation
-
-If your work uses MultiMAP, please cite the [paper](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02565-y):
-
-	@article{jain2021multimap,
-	  title={MultiMAP: dimensionality reduction and integration of multimodal data},
-	  author={Jain, Mika Sarkin and Polanski, Krzysztof and Conde, Cecilia Dominguez and Chen, Xi and Park, Jongeun and Mamanova, Lira and Knights, Andrew and Botting, Rachel A and Stephenson, Emily and Haniffa, Muzlifah and others},
-	  journal={Genome biology},
-	  volume={22},
-	  number={1},
-	  pages={1--26},
-	  year={2021},
-	  publisher={BioMed Central}
-	}
-
-## Contact
-
-Mika Sarkin Jain - mikasarkinjain@gmail.com \
-Mirjana Efremova -  m.efremova@qmul.ac.uk \
-Sarah Teichmann - st9@sanger.ac.uk
+# MultiMAP
+**MultiMAP** is a method for integrating single cell multi-omics. MultiMAP can also be used for batch correction. More detail is available in our [paper](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02565-y).
+
+<p align="center"><img src="https://easymed.ai/models/AlyssaS/MultiMAP/git/ci/main/tree/docs/MultiMAP_schematic.png?raw=true" width="900"></p>
+
+
+## Installation
+
+```bash
+pip3 install git+https://github.com/Teichlab/MultiMAP.git
+```
+
+## Usage and Documentation
+
+MultiMAP offers two functions accepting AnnData objects on input:
+  - `MultiMAP.Integration()` expects a list of one AnnData per dataset, with the desired dimensionality reduction precomputed and stored in `.obsm`. This allows for refining the initial dimensionality reduction, e.g. if wishing to use `TFIDF_LSI` for ATAC data and PCA for RNA data.
+  - `MultiMAP.Batch()` expects a single AnnData object with the dataset information stored in an `.obs` column. This allows for convenient integration with minimal preparation if all datasets can be treated with the same dimensionality reduction.
+
+There's also an AnnData-independent `MultiMAP.matrix.MultiMAP()` function which operates directly on dimensionality reduction matrices. This requires precomputing all pairwise dimensionality reductions prior to calling MultiMAP.
+
+A tutorial covering both RNA-ATAC integration and RNA-Seq batch correction use can be found [here](https://nbviewer.jupyter.org/github/Teichlab/MultiMAP/blob/master/examples/tutorial.ipynb).
+
+Documentation of the function parameters can be found on [ReadTheDocs](https://multimap.readthedocs.io/en/latest/).
+
+## Citation
+
+If your work uses MultiMAP, please cite the [paper](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02565-y):
+
+	@article{jain2021multimap,
+	  title={MultiMAP: dimensionality reduction and integration of multimodal data},
+	  author={Jain, Mika Sarkin and Polanski, Krzysztof and Conde, Cecilia Dominguez and Chen, Xi and Park, Jongeun and Mamanova, Lira and Knights, Andrew and Botting, Rachel A and Stephenson, Emily and Haniffa, Muzlifah and others},
+	  journal={Genome biology},
+	  volume={22},
+	  number={1},
+	  pages={1--26},
+	  year={2021},
+	  publisher={BioMed Central}
+	}
+
+## Contact
+
+Mika Sarkin Jain - mikasarkinjain@gmail.com \
+Mirjana Efremova -  m.efremova@qmul.ac.uk \
+Sarah Teichmann - st9@sanger.ac.uk