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Models:
Alyssa Salazar
AlyssaS/
MetaNet
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---





  
  

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output:





  
  

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  github_document:





  
  

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    html_preview: false





  
  

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---





  
  

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<!-- README.md is generated from README.Rmd. Please edit that file -->

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<!-- README.md is generated from README.Rmd. Please edit that file -->





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# MetaNet <img src="man/figures/MetaNet.png" align="right" width="120" />

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```{r, include = FALSE}





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knitr::opts_chunk$set(





  
  

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  collapse = TRUE,





  
  

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  comment = "#>",





  
  

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  fig.path = "man/figures/README-",





  
  

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  out.width = "100%"





  
  

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)





  
  

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devtools::load_all("~/Documents/R/MetaNet/MetaNet/")





  
  

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library(badger)





  
  

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```





  
  

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```{r include=FALSE,eval=FALSE}





  
  

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library(hexSticker)





  
  

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showtext::showtext_auto()





  
  

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sticker("~/Documents/R/test/icons/网络.png",





  
  

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  package = "MetaNet",





  
  

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  p_size = 30, p_color = "black", p_y = 1.4,





  
  

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  p_fontface = "bold.italic", p_family = "Comic Sans MS",





  
  

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  s_x = 1, s_y = .75, s_width = 0.4, s_height = 0.4,





  
  

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  h_fill = "#D8E2DC", h_color = "#83A98C",





  
  

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  filename = "man/figures/MetaNet.png", dpi = 300





  
  

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)





  
  

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```





  
  

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<!-- badges: start -->

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<!-- badges: start -->






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[![R-CMD-check](https://github.com/Asa12138/MetaNet/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/Asa12138/MetaNet/actions/workflows/R-CMD-check.yaml)

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[![R-CMD-check](https://github.com/Asa12138/MetaNet/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/Asa12138/MetaNet/actions/workflows/R-CMD-check.yaml)





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[![](https://img.shields.io/badge/blog-@asa-blue.svg)](https://asa-blog.netlify.app/)

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`r badge_custom("blog", "@asa", "blue", "https://asa-blog.netlify.app/")`





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[![](http://cranlogs.r-pkg.org/badges/grand-total/MetaNet)](https://cran.r-project.org/package=MetaNet)

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`r badge_cran_download("MetaNet", type = "grand-total")`





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[![](http://cranlogs.r-pkg.org/badges/last-month/MetaNet)](https://cran.r-project.org/package=MetaNet)

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`r badge_cran_download("MetaNet", type = "last-month")`





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[![](https://www.r-pkg.org/badges/version/MetaNet?color=green)](https://cran.r-project.org/package=MetaNet)

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`r badge_cran_release("MetaNet","green")`





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[![](https://img.shields.io/badge/devel%20version-0.2.5-green.svg)](https://github.com/Asa12138/MetaNet)

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`r badge_devel("Asa12138/MetaNet", color = "green")`






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<!-- badges: end -->

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<!-- badges: end -->





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MetaNet: Network analysis for multi-omics

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MetaNet: Network analysis for multi-omics





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The HTML documentation of the latest version is available at [Github

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The HTML documentation of the latest version is available at [Github page](https://asa12138.github.io/MetaNet/).





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page](https://asa12138.github.io/MetaNet/).

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## Tutorial📖

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## Tutorial📖





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Please go to **<https://bookdown.org/Asa12138/metanet_book/>** for the

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Please go to **<https://bookdown.org/Asa12138/metanet_book/>** for the full vignette.





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full vignette.

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## Installation

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## Installation





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You can install the released version of `MetaNet` from

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You can install the released version of `MetaNet` from [CRAN](https://CRAN.R-project.org) with:





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[CRAN](https://CRAN.R-project.org) with:

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``` r

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``` r






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install.packages("MetaNet")

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install.packages("MetaNet")






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```

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```





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You can install the development version of `MetaNet` from

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You can install the development version of `MetaNet` from [GitHub](https://github.com/) with:





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[GitHub](https://github.com/) with:

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``` r

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``` r






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# install.packages("devtools")

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# install.packages("devtools")






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devtools::install_github("Asa12138/MetaNet")

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devtools::install_github("Asa12138/MetaNet")






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```

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```





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## Citation

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## Citation





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Please cite:

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Please cite:





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Chen Peng (2025). MetaNet: Network Analysis for Omics Data. *R package*,

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Chen Peng (2025). MetaNet: Network Analysis for Omics Data. _R package_, <https://github.com/Asa12138/MetaNet>.





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<https://github.com/Asa12138/MetaNet>.

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## Need helps?

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## Need helps?





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If you have questions/issues, please visit [MetaNet

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If you have questions/issues, please visit [MetaNet homepage](https://github.com/Asa12138/MetaNet) first. Your problems are mostly documented.





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homepage](https://github.com/Asa12138/MetaNet) first. Your problems are

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mostly documented.

  
  





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If you think you found a bug, please post on [github

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If you think you found a bug, please post on [github issue](https://github.com/Asa12138/MetaNet/issues).






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issue](https://github.com/Asa12138/MetaNet/issues).