Diff of /man/zp_analyse.Rd [000000] .. [13df9a]

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+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/6.modules.R
+\name{zp_analyse}
+\alias{zp_analyse}
+\alias{zp_plot}
+\title{Zi-Pi calculate}
+\usage{
+zp_analyse(go_m, mode = 2, use_origin = TRUE)
+
+zp_plot(go, label = TRUE, mode = 1)
+}
+\arguments{
+\item{go_m}{igraph object after \code{module_detect()}}
+
+\item{mode}{plot style, 1~3}
+
+\item{use_origin}{use original_module, default:TRUE, if FALSE, use module}
+
+\item{go}{igraph object after zp_analyse()}
+
+\item{label}{show label or not}
+}
+\value{
+igraph
+
+a ggplot object
+}
+\description{
+Zi-Pi calculate
+
+Zi-Pi plot of vertexes
+}
+\examples{
+data("c_net")
+module_detect(co_net) -> co_net_modu
+zp_analyse(co_net_modu) -> co_net_modu
+zp_plot(co_net_modu)
+zp_plot(co_net_modu, mode = 3)
+
+}
+\references{
+\enumerate{
+\item Guimerà, R. & Amaral, L. Functional cartography of complex metabolic networks. (2005) doi:10.1038/nature03288.
+}
+}
+\seealso{
+Other module: 
+\code{\link{filter_n_module}()},
+\code{\link{get_community}()},
+\code{\link{get_module_eigen}()},
+\code{\link{get_module}()},
+\code{\link{module_detect}()},
+\code{\link{module_eigen}()},
+\code{\link{module_net}()},
+\code{\link{summary_module}()},
+\code{\link{to_module_net}()}
+}
+\concept{module}