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b/man/zp_analyse.Rd |
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% Generated by roxygen2: do not edit by hand |
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% Please edit documentation in R/6.modules.R |
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\name{zp_analyse} |
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\alias{zp_analyse} |
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\alias{zp_plot} |
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\title{Zi-Pi calculate} |
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\usage{ |
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zp_analyse(go_m, mode = 2, use_origin = TRUE) |
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zp_plot(go, label = TRUE, mode = 1) |
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} |
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\arguments{ |
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\item{go_m}{igraph object after \code{module_detect()}} |
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\item{mode}{plot style, 1~3} |
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\item{use_origin}{use original_module, default:TRUE, if FALSE, use module} |
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\item{go}{igraph object after zp_analyse()} |
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\item{label}{show label or not} |
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} |
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\value{ |
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igraph |
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a ggplot object |
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} |
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\description{ |
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Zi-Pi calculate |
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Zi-Pi plot of vertexes |
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} |
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\examples{ |
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data("c_net") |
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module_detect(co_net) -> co_net_modu |
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zp_analyse(co_net_modu) -> co_net_modu |
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zp_plot(co_net_modu) |
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zp_plot(co_net_modu, mode = 3) |
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} |
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\references{ |
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\enumerate{ |
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\item Guimerà, R. & Amaral, L. Functional cartography of complex metabolic networks. (2005) doi:10.1038/nature03288. |
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} |
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} |
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\seealso{ |
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Other module: |
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\code{\link{filter_n_module}()}, |
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\code{\link{get_community}()}, |
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\code{\link{get_module_eigen}()}, |
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\code{\link{get_module}()}, |
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\code{\link{module_detect}()}, |
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\code{\link{module_eigen}()}, |
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\code{\link{module_net}()}, |
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\code{\link{summary_module}()}, |
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\code{\link{to_module_net}()} |
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} |
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\concept{module} |