--- a
+++ b/man/multi_net_build.Rd
@@ -0,0 +1,63 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/2-1.build.R
+\name{multi_net_build}
+\alias{multi_net_build}
+\title{Multi-omics network build}
+\usage{
+multi_net_build(
+  ...,
+  mode = "full",
+  method = "spearman",
+  filename = FALSE,
+  p.adjust.method = NULL,
+  r_threshold = 0.6,
+  p_threshold = 0.05,
+  use_p_adj = TRUE,
+  delete_single = TRUE
+)
+}
+\arguments{
+\item{...}{some omics abundance tables}
+
+\item{mode}{"full"}
+
+\item{method}{"spearman" or "pearson"}
+
+\item{filename}{the prefix of saved .corr file or FALSE}
+
+\item{p.adjust.method}{see \code{\link[stats]{p.adjust}}}
+
+\item{r_threshold}{r_threshold (default: >0.6)}
+
+\item{p_threshold}{p_threshold (default: <0.05)}
+
+\item{use_p_adj}{use the p.adjust instead of p-value (default: TRUE)}
+
+\item{delete_single}{should delete single vertexes?}
+}
+\value{
+metanet
+}
+\description{
+Multi-omics network build
+}
+\examples{
+data("multi_test")
+multi1 <- multi_net_build(list(Microbiome = micro, Metabolome = metab, Transcriptome = transc))
+multi1 <- c_net_set(multi1, micro_g, metab_g, transc_g,
+  vertex_class = c("Phylum", "kingdom", "type")
+)
+multi1 <- c_net_set(multi1, data.frame("Abundance1" = colSums(micro)),
+  data.frame("Abundance2" = colSums(metab)), data.frame("Abundance3" = colSums(transc)),
+  vertex_size = paste0("Abundance", 1:3)
+)
+c_net_plot(multi1)
+}
+\seealso{
+Other build: 
+\code{\link{c_net_build}()},
+\code{\link{c_net_from_edgelist}()},
+\code{\link{c_net_set}()},
+\code{\link{c_net_update}()}
+}
+\concept{build}