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+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/getNEMO.R
+\name{nemo.clustering}
+\alias{nemo.clustering}
+\title{NEMO clustering}
+\usage{
+nemo.clustering(omics.list, num.clusters = NULL, num.neighbors = NA)
+}
+\arguments{
+\item{omics.list}{A list of the data to be clustered, where each an entry is a matrix of features x samples.}
+
+\item{k}{The number of neighbors to use for each omic. It can either be a number, a list of numbers
+or NA. If it is a number, this is the number of neighbors used for all omics. If this is a list,
+the number of neighbors are taken for each omic from that list. If it is NA, each omic chooses the
+number of neighbors to be the number of samples divided by NUM.NEIGHBORS.RATIO.}
+}
+\value{
+A single matrix measuring similarity between the samples across all omics.
+}
+\description{
+Performs multi-omic clustering on a datset using the NEMO algorithm.
+Uses nemo.num.clusters to estimate the number of clusters.
+}
+\references{
+Rappoport N, Shamir R (2019). NEMO: cancer subtyping by integration of partial multi-omic data. Bioinformatics, 35(18):3348-3356.
+}
+\author{
+Nimrod Rappoport
+}
+\keyword{internal}