--- a
+++ b/man/affinityMatrix.Rd
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/getNEMO.R
+\name{affinityMatrix}
+\alias{affinityMatrix}
+\title{affinityMatrix}
+\usage{
+affinityMatrix(Diff, K = 20, sigma = 0.5)
+}
+\arguments{
+\item{Diff}{Distance Matrix.}
+
+\item{K}{Number of nearest neighbors.}
+
+\item{sigma}{Variance for local model.}
+}
+\value{
+affinityMatrix
+}
+\description{
+affinityMatrix
+}
+\references{
+Wang B, Mezlini AM, Demir F, et al (2014). Similarity network fusion for aggregating data types on a genomic scale. Nat Methods, 11(3):333-337.
+}
+\author{
+Bo Wang, Aziz Mezlini, Feyyaz Demir, Marc Fiume, Zhuowen Tu, Michael Brudno, Benjamin Haibe-Kains, Anna Goldenberg
+}
+\keyword{internal}