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Models:
Alyssa Salazar
AlyssaS/
MOVE
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Data: Tabular Time Series Specialty: Endocrinology Laboratory: Blood Tests EHR: Demographics Diagnoses Medications Omics: Genomics Multi-omics Transcriptomics Wearable: Activity Clinical Purpose: Treatment Response Assessment Task: Biomarker Discovery
[c23b31]: / src / move / conf / task / analyze_latent.yaml

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defaults:

  - analyze_latent_schema



batch_size: 10



reducer:

  _target_: sklearn.manifold.TSNE



model:

  categorical_weights: ${weights:${data.categorical_inputs}}

  continuous_weights: ${weights:${data.continuous_inputs}}

  num_hidden:

    - 1000

  num_latent: 150

  beta: 0.0001

  dropout: 0.1

  cuda: false



training_loop:

  lr: 1e-4

  num_epochs: 40

  batch_dilation_steps:

    - 50

    - 100

    - 150

  kld_warmup_steps:

    - 15

    - 20

    - 25

  early_stopping: false

  patience: 0