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Models:
Alyssa Salazar
AlyssaS/
MOVE
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Downloads: 1
Data: Tabular Time Series Specialty: Endocrinology Laboratory: Blood Tests EHR: Demographics Diagnoses Medications Omics: Genomics Multi-omics Transcriptomics Wearable: Activity Clinical Purpose: Treatment Response Assessment Task: Biomarker Discovery
[c23b31]: / src / move / conf / data / base_data.yaml

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# raw - for raw data (e.g., TSVs, text)

# interim - for intermediate data (e.g., NPYs, trained models, latents)

# processed - for results (e.g., TSVs)

raw_data_path: data/

interim_data_path: interim_data/

results_path: processed_data/



sample_names: baseline_ids



categorical_inputs:

  - name: diabetes_genotypes

    weight: 1

  - name: baseline_drugs

    weight: 1

  - name: baseline_categorical

    weight: 1



continuous_inputs:

  - name: baseline_continuous

    weight: 2

  - name: baseline_transcriptomics

    weight: 1

  - name: baseline_diet_wearables

    weight: 1

  - name: baseline_proteomic_antibodies

    weight: 1

  - name: baseline_target_metabolomics

    weight: 1

  - name: baseline_untarget_metabolomics

    weight: 1

  - name: baseline_metagenomics

    weight: 1



categorical_names: ${names:${data.categorical_inputs}}

continuous_names: ${names:${data.continuous_inputs}}

categorical_weights: ${weights:${data.categorical_inputs}}

continuous_weights: ${weights:${data.continuous_inputs}}