Data: Tabular Time Series Specialty: Endocrinology Laboratory: Blood Tests EHR: Demographics Diagnoses Medications Omics: Genomics Multi-omics Transcriptomics Wearable: Activity Clinical Purpose: Treatment Response Assessment Task: Biomarker Discovery
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Install
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=======
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MOVE is distributed as ``move-dl``, a Python package.
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It requires Python 3.9 (or later) and third-party libraries, such as `PyTorch`_
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and `Hydra`_. These dependencies will be installed automatically when you
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install with ``pip``.
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Install the stable version
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--------------------------
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We recommend installing ``move-dl`` in a fresh virtual environment. If you wish
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to learn how to create and manage virtual environments with Conda, please
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follow `these instructions`_.
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The latest stable version of ``move-dl`` can be installed with ``pip``.
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.. code-block:: bash
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    >>> pip install move-dl
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Install the development version
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-------------------------------
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If you wish to install the development of ``move-dl``, create a new virtual
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environment, and do:
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.. code-block:: bash
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    >>> pip install git+https://github.com/RasmussenLab/MOVE@developer
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Alternatively, you can clone ``move-dl`` from `GitHub`_ and install by
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running the following command from the top-level source directory:
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.. code-block:: bash
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    >>> pip install -e .
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The ``-e`` flag installs the project in "editable" mode, so you can follow the
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development branch and update your installation by pulling from GitHub.
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.. _PyTorch: https://pytorch.org/
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.. _Hydra: https://hydra.cc/
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.. _GitHub: https://github.com/RasmussenLab/MOVE
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.. _these instructions: https://docs.conda.io/projects/conda/en/latest/user-guide/getting-started.html