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Raw code usage:

  • LIBRA fine-tuning code (LIBRA_fine_tune_code)
  • Use paired-omics arrays as input for fine_tune_libra.py

    • Use "fine_tune_libra.py" for LIBRA models training in parallel using desired grid of hyperparameters.

      Outputs: Different outputs generated during the training will be stored in the working directory.

  • PPJI metric computation over all fine-tune models:

    • Use supp_code.R stored at R code employed on LIBRA manuscript.