Diff of /man/get_tfs.Rd [000000] .. [9abfcf]

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+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/utils.R
+\name{get_tfs}
+\alias{get_tfs}
+\title{Extract TF names from scRNA data and tf2motifs}
+\usage{
+get_tfs(
+  hummus,
+  assay = NULL,
+  store_tfs = TRUE,
+  output_file = NULL,
+  verbose = 0
+)
+}
+\arguments{
+\item{output_file}{(character) - Path to output file.}
+
+\item{verbose}{(integer) - Verbosity level. Default: 1.}
+
+\item{species}{(character) - Species name. Default: "human".}
+
+\item{genes}{(vector(character)) - List of expressed genes.}
+
+\item{tf2motifs}{(data.frame) - TF to motifs names mapping.
+Columns: motif, tf.}
+}
+\value{
+TFs (vector(character)) - List of TFs expressed with motifs.
+}
+\description{
+Extract TF names from scRNA data and tf2motifs
+}