--- a +++ b/homeworks/hw2/README.md @@ -0,0 +1,23 @@ +Description +------------ + +The second homework is about a multi-omic analysis of brain tumors called gliomas using mutations and copy-number-variations along with other clinical variables. + +With this hands-on exercise, I first ask you to do some exploratory data analysis. +Then I ask you to carry out a manual hyperparameter search for classifying cancer types in the dataset. +Finally, I ask you to carry out a single task and multi-task automated hyperparameter tuning to predict survival risk scores of patients. + +Please download the following notebook: + +``` +wget https://raw.githubusercontent.com/BIMSBbioinfo/compgen_course_2025_module3/refs/heads/main/homeworks/hw2/day2_hw_lgg_gbm.ipynb +``` + +I provide some chunks of code and text that are required for subsequent questions. +I left some cells as blanks which I ask you to fill in as part of exercises. + +If you have questions or run into issues, please use the appropriate category of the [discussion board](https://github.com/BIMSBbioinfo/compgen_course_2025_module3/discussions). + + + +