COPD_multiomics / Git / Commit [16eabd]

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COPD_multiomics

Downloads: 1

Commit [16eabd] main

Initial commit

Authored by: AlyssaS 2025-04-19

Browse code at this revision

Parent: [b0910d]

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added	4-Multi-Omic Integration/scripts/1.WGCNA_metabolomics.r
added	4-Multi-Omic Integration/scripts/1.WGCNA_transcriptomics.r
added	4-Multi-Omic Integration/scripts/2.significant.hostP.features.r
added	4-Multi-Omic Integration/scripts/2.significant.hostT.modules.r
added	4-Multi-Omic Integration/scripts/2.significant.metaB.modules.r
added	4-Multi-Omic Integration/scripts/2.significant.metaG.modules.r
added	4-Multi-Omic Integration/scripts/3.mediation_hostT.2.hostP.r
added	4-Multi-Omic Integration/scripts/3.mediation_metaB.2.hostT.r
added	4-Multi-Omic Integration/scripts/3.mediation_metaG.2.metaB.r
added	4-Multi-Omic Integration/scripts/4.HostT.HostP.link.r
added	4-Multi-Omic Integration/scripts/4.KO2cmpd.r
added	4-Multi-Omic Integration/scripts/4.KO2metabo.r
added	4-Multi-Omic Integration/scripts/4.MetaB.HostT.link.r
added	4-Multi-Omic Integration/scripts/4.MetaG.MetaB.link.r
added	4-Multi-Omic Integration/scripts/4_cmpd2metabo.pl
added	4-Multi-Omic Integration/scripts/4_metabolome2stitch.pl
added	4-Multi-Omic Integration/scripts/5.LOSO.KO.r
added	4-Multi-Omic Integration/scripts/5.LOSO.KO.zscore.r
added	4-Multi-Omic Integration/scripts/5.LOSO.delta.r
added	4-Multi-Omic Integration/scripts/6.random_forest.r
added	5-Datasets/HostT_name_mapping.txt
added	5-Datasets/MetaB_name_mapping.txt
added	5-Datasets/compound_information.txt
added	5-Datasets/metabolome_intensity.txt
added	5-Datasets/metabolome_module.txt

4-Multi-Omic Integration/scripts/1.WGCNA_metabolomics.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/1.WGCNA_transcriptomics.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/2.significant.hostP.features.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/2.significant.hostT.modules.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/2.significant.metaB.modules.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/2.significant.metaG.modules.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/3.mediation_hostT.2.hostP.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/3.mediation_metaB.2.hostT.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/3.mediation_metaG.2.metaB.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4.HostT.HostP.link.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4.KO2cmpd.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4.KO2metabo.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4.MetaB.HostT.link.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4.MetaG.MetaB.link.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4_cmpd2metabo.pl Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/4_metabolome2stitch.pl Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/5.LOSO.KO.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/5.LOSO.KO.zscore.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/5.LOSO.delta.r Diff Switch to side-by-side view

4-Multi-Omic Integration/scripts/6.random_forest.r Diff Switch to side-by-side view

5-Datasets/HostT_name_mapping.txt Diff Switch to side-by-side view

5-Datasets/MetaB_name_mapping.txt Diff Switch to side-by-side view

5-Datasets/compound_information.txt Diff Switch to side-by-side view

5-Datasets/metabolome_intensity.txt Diff Switch to side-by-side view

5-Datasets/metabolome_module.txt Diff Switch to side-by-side view

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