a b/softwares_database/samtools.txt 

  1
  
1. Install samtools





  
  

  2
  
mamba install -c bioconda samtools -y





  
  

  3
  





  
  

  4
  
2. Sort sam files and output them as bam files





  
  

  5
  
samtools sort <path to sam file> -o <path to output bam file>