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+Help Pages
+annotate_regions	A function to intersect user region data with annotation data
+annotations	example_annotations data
+annotatr	annotatr: Annotation of Genomic Regions to Functional Annotations
+annotatr_cache	A global-variable to hold custom annotations loaded in an R session
+build_ah_annots	A helper function to build arbitrary annotatinos from AnnotationHub
+build_annotations	A function to build annotations from TxDb.* and AnnotationHub resources
+build_cpg_annots	A helper function to build CpG related annotations.
+build_enhancer_annots	A helper function to build enhancer annotations for hg19 and mm10 from FANTOM5.
+build_gene_annots	A helper function to build genic annotations.
+build_hmm_annots	A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.
+build_lncrna_annots	A helper function to build lncRNA annotations.
+builtin_annotations	Function listing which annotations are available.
+builtin_genomes	Function returning supported TxDb.* genomes
+check_annotations	Function to check for valid annotations
+expand_annotations	Function to expand annotation shortcuts
+get_cellline_from_code	Function to return cell line from chromatin annotation code
+get_cellline_from_shortcut	Function to return cell line from chromatin annotation shortcut
+get_orgdb_name	Function to get correct org.* package name based on genome
+get_txdb_name	Function to get correct TxDb.* package name based on genome
+plot_annotation	Plot the number of regions per annotation
+plot_categorical	Plot a categorical data variable over another
+plot_coannotations	Plot pair-wise annotations across regions
+plot_numerical	Plot numerical data over regions or regions summarized over annotations
+plot_numerical_coannotations	Plot numerical data occurring in pairs of annotations
+randomize_regions	Randomize Regions
+read_annotations	Read custom annotations
+read_regions	Read genomic regions in BEDX+Y format
+reformat_hmm_codes	Function to recode classes from chromHMM type column
+subset_order_tbl	Function to subset a tbl_df or grouped_df by a column
+summarize_annotations	Summarize annotation counts
+summarize_categorical	Summarize categorical data over groupings of annotated regions
+summarize_numerical	Summarize numerical data over groupings of annotated regions
+tidy_annotations	Function to tidy up annotation accessors for visualization