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b/examples/case1.2/config.yaml |
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data_list: [ './examples/case1.2/data/SRR1374921.fastq.gz: single-end mouse rna-seq reads, replicate 1 in LoGlu group', |
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'./examples/case1.2/data/SRR1374922.fastq.gz: single-end mouse rna-seq reads, replicate 2 in LoGlu group', |
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'./examples/case1.2/data/SRR1374923.fastq.gz: single-end mouse rna-seq reads, replicate 1 in HiGlu group', |
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'./examples/case1.2/data/SRR1374924.fastq.gz: single-end mouse rna-seq reads, replicate 2 in HiGlu group', |
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'./examples/case1.2/data/TruSeq3-SE.fa: trimming adapter', |
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'./examples/case1.2/data/mm39.fa: mouse mm39 genome fasta', |
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'./examples/case1.2/data/mm39.ncbiRefSeq.gtf: mouse mm39 genome annotation' ] |
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output_dir: './examples/case1.2/output' |
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goal_description: 'Identify top5 down-regulated genes in HiGlu group' |
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meta: |
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info: 'meta-data recorded by users for reference only' |
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title: 'The transcriptional landscape of mouse beta cells compared to human beta cells reveals notable species differences in long non-coding RNA and protein-coding gene expression, ' |
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url: 'https://pubmed.ncbi.nlm.nih.gov/25051960/' |