622 lines (574 with data), 13.0 kB

! This sample v3s pipeline file examplifies how to analyze data from RBDS study for one subject
! The model mdh file and the c3d files have to be located in the same directory.

File_New
;

! Choosing the file directory
Set_Pipeline_Parameter_To_Folder_Path
/PARAMETER_NAME=FOLDER
/PARAMETER_VALUE=
! /PARAMETER_VALUE_SEARCH_FOR=
! /PARAMETER_VALUE_REPLACE_WITH=
! /PARAMETER_VALUE_APPEND=
;

Create_Hybrid_Model
/CALIBRATION_FILE=::FOLDER&RBDS001static.c3d
! /RANGE=ALL_FRAMES
;

Apply_Model_Template
/MODEL_TEMPLATE=::FOLDER&RBDSmodelV3D.mdh
/CALIBRATION_FILE=::FOLDER&RBDS001static.c3d
;

Set_Subject_Mass
/CALIBRATION_FILE=::FOLDER&RBDS001static.c3d
/WEIGHT=62
;

Set_Subject_Height
/CALIBRATION_FILE=::FOLDER&RBDS001static.c3d
/HEIGHT=181
;

! Update the model
Build_Model
/CALIBRATION_FILE=::FOLDER&RBDS001static.c3d
! /REBUILD_ALL_MODELS=FALSE 
;

File_Open
/FILE_NAME=::FOLDER&RBDS001runT*.c3d
;

Assign_Model_File
/CALIBRATION_FILE=::FOLDER&RBDS001static.c3d
/MOTION_FILE_NAMES=::FOLDER&RBDS001runT*.c3d
! /REMOVE_EXISTING_ASSIGNMENTS=FALSE
;

Assign_Tags_To_Files
/MOTION_FILE_NAMES=::FOLDER&RBDS001runT25.c3d
/TAGS=RUN25
;

Assign_Tags_To_Files
/MOTION_FILE_NAMES=::FOLDER&RBDS001runT35.c3d
/TAGS=RUN35
;

Assign_Tags_To_Files
/MOTION_FILE_NAMES=::FOLDER&RBDS001runT45.c3d
/TAGS=RUN45
;

Event_Delete
/EVENT_NAME=LHS+LON+LOFF+LTO+RON+RHS+ROFF+RTO
! /EVENT_SEQUENCE=
! /EXCLUDE_EVENTS=
! /TIME=
;

Interpolate
/SIGNAL_TYPES=TARGET
! /SIGNAL_NAMES=
! /SIGNAL_FOLDER=ORIGINAL
! /RESULT_SUFFIX=
! /RESULT_FOLDER=PROCESSED
/MAXIMUM_GAP=20
! /NUM_FIT=3
! /POLYNOMIAL_ORDER=3
;

Lowpass_Filter
/SIGNAL_TYPES=ANALOG
! /SIGNAL_NAMES=
/SIGNAL_FOLDER=ORIGINAL
! /RESULT_SUFFIX=
/RESULT_FOLDER=PROCESSED
! /FILTER_CLASS=BUTTERWORTH
/FREQUENCY_CUTOFF=10
! /NUM_REFLECTED=0
! /TOTAL_BUFFER_SIZE=0
! /NUM_BIDIRECTIONAL_PASSES=1
;

Set_Force_Platform_Threshold
/THRESHOLD=20
! /SET_AS_DEFAULT=FALSE
;

Set_Use_Processed_Analog
/USE_PROCESSED=TRUE
;

Lowpass_Filter
/SIGNAL_TYPES=TARGET
! /SIGNAL_NAMES=
/SIGNAL_FOLDER=PROCESSED
! /RESULT_SUFFIX=
/RESULT_FOLDER=PROCESSED
! /FILTER_CLASS=BUTTERWORTH
/FREQUENCY_CUTOFF=10
! /NUM_REFLECTED=6
! /TOTAL_BUFFER_SIZE=6
! /NUM_BIDIRECTIONAL_PASSES=1
;

Recalc
;

Automatic_Gait_Events
! /SELECT_X=FALSE
! /SELECT_Y=FALSE
/SELECT_Z=TRUE
! /FRAME_WINDOW=8
/USE_TPR=TRUE
;

! Calculate Angular Kinematics
Compute_Model_Based_Data
/RESULT_NAME=R Hip Angle
/FUNCTION=JOINT_ANGLE
/SEGMENT=RTH
/REFERENCE_SEGMENT=RPV
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=L Hip Angle
/FUNCTION=JOINT_ANGLE
/SEGMENT=LTH
/REFERENCE_SEGMENT=RPV
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=R Knee Angle
/FUNCTION=JOINT_ANGLE
/SEGMENT=RSK
/REFERENCE_SEGMENT=RTH
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
/NEGATEZ=TRUE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=L Knee Angle
/FUNCTION=JOINT_ANGLE
/SEGMENT=LSK
/REFERENCE_SEGMENT=LTH
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
/NEGATEZ=TRUE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Right Ankle Angle
/FUNCTION=JOINT_ANGLE
/SEGMENT=Right Virtual Foot
/REFERENCE_SEGMENT=RSK
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

! To measure INV/EV of the ankle
Compute_Model_Based_Data
/RESULT_NAME=Right Ankle Angle 2
/FUNCTION=JOINT_ANGLE
/SEGMENT=Right Foot InvEv
/REFERENCE_SEGMENT=RSK
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Left Ankle Angle
/FUNCTION=JOINT_ANGLE
/SEGMENT=Left Virtual Foot
/REFERENCE_SEGMENT=LSK
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

! To measure INV/EV of the ankle
Compute_Model_Based_Data
/RESULT_NAME=Left Ankle Angle 2
/FUNCTION=JOINT_ANGLE
/SEGMENT=left Foot InvEv
/REFERENCE_SEGMENT=LSK
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
! /NORMALIZATION=FALSE
! /NORMALIZATION_METHOD=FALSE
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=RGRF
/FUNCTION=GRF_DATA
/SEGMENT=RFT
/REFERENCE_SEGMENT=
! /RESOLUTION_COORDINATE_SYSTEM=LAB
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=NORMALIZE_TO_LOCAL_METRIC
/NORMALIZATION_METRIC=MASS
! /NEGATEX=FALSE
! /NEGATEY=FALSE
/NEGATEZ=TRUE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
;

Compute_Model_Based_Data
/RESULT_NAME=LGRF
/FUNCTION=GRF_DATA
/SEGMENT=LFT
/REFERENCE_SEGMENT=
! /RESOLUTION_COORDINATE_SYSTEM=LAB
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=NORMALIZE_TO_LOCAL_METRIC
/NORMALIZATION_METRIC=MASS
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
;

Compute_Model_Based_Data
/RESULT_NAME=Right Hip Moment
/FUNCTION=JOINT_MOMENT
/SEGMENT=RTH
/REFERENCE_SEGMENT=RPV
/RESOLUTION_COORDINATE_SYSTEM=RPV
/USE_CARDAN_SEQUENCE=TRUE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Left Hip Moment
/FUNCTION=JOINT_MOMENT
/SEGMENT=LTH
/REFERENCE_SEGMENT=RPV
/RESOLUTION_COORDINATE_SYSTEM=RPV
/USE_CARDAN_SEQUENCE=TRUE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Right Knee Moment
/FUNCTION=JOINT_MOMENT
/SEGMENT=RSK
/REFERENCE_SEGMENT=RTH
/RESOLUTION_COORDINATE_SYSTEM=RTH
/USE_CARDAN_SEQUENCE=TRUE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Left Knee Moment
/FUNCTION=JOINT_MOMENT
/SEGMENT=LSK
/REFERENCE_SEGMENT=LTH
/RESOLUTION_COORDINATE_SYSTEM=LTH
/USE_CARDAN_SEQUENCE=TRUE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Right Ankle Moment
/FUNCTION=JOINT_MOMENT
/SEGMENT=RFT
/REFERENCE_SEGMENT=RSK
/RESOLUTION_COORDINATE_SYSTEM=RSK
/USE_CARDAN_SEQUENCE=TRUE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
/NEGATEX=TRUE
/NEGATEY=TRUE
/NEGATEZ=TRUE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
! /TREADMILL_DATA=FALSE 
! /TREADMILL_DIRECTION=UNIT_VECTOR(0,1,0)
! /TREADMILL_SPEEED=
;

Compute_Model_Based_Data
/RESULT_NAME=Left Ankle Moment
/FUNCTION=JOINT_MOMENT
/SEGMENT=LFT
/REFERENCE_SEGMENT=LSK
/RESOLUTION_COORDINATE_SYSTEM=LSK
/USE_CARDAN_SEQUENCE=TRUE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
/NEGATEZ=TRUE
/AXIS1=Z
/AXIS2=X
/AXIS3=Y
;

Compute_Model_Based_Data
/RESULT_NAME=Right Ankle Power
/FUNCTION=JOINT_POWER_SCALAR
/SEGMENT=RFT
/REFERENCE_SEGMENT=
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
! /AXIS1=X
! /AXIS2=Y
! /AXIS3=Z
;

Compute_Model_Based_Data
/RESULT_NAME=Right Knee Power
/FUNCTION=JOINT_POWER_SCALAR
/SEGMENT=RSK
/REFERENCE_SEGMENT=
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
! /AXIS1=X
! /AXIS2=Y
! /AXIS3=Z
;

Compute_Model_Based_Data
/RESULT_NAME=Right Hip Power
/FUNCTION=JOINT_POWER_SCALAR
/SEGMENT=RTH
/REFERENCE_SEGMENT=
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
! /AXIS1=X
! /AXIS2=Y
! /AXIS3=Z
;

Compute_Model_Based_Data
/RESULT_NAME=Left Ankle Power
/FUNCTION=JOINT_POWER_SCALAR
/SEGMENT=LFT
/REFERENCE_SEGMENT=
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
! /AXIS1=X
! /AXIS2=Y
! /AXIS3=Z
;

Compute_Model_Based_Data
/RESULT_NAME=Left Knee Power
/FUNCTION=JOINT_POWER_SCALAR
/SEGMENT=LSK
/REFERENCE_SEGMENT=
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
! /AXIS1=X
! /AXIS2=Y
! /AXIS3=Z
;

Compute_Model_Based_Data
/RESULT_NAME=Left Hip Power
/FUNCTION=JOINT_POWER_SCALAR
/SEGMENT=LTH
/REFERENCE_SEGMENT=
/RESOLUTION_COORDINATE_SYSTEM=
! /USE_CARDAN_SEQUENCE=FALSE
/NORMALIZATION=TRUE
/NORMALIZATION_METHOD=DEFAULT_NORMALIZATION
! /NORMALIZATION_METRIC=
! /NEGATEX=FALSE
! /NEGATEY=FALSE
! /NEGATEZ=FALSE
! /AXIS1=X
! /AXIS2=Y
! /AXIS3=Z
;

For_Each
/Iteration_Parameter_Name=TAG_NAMES
/Items=RUN25+RUN35+RUN45
;

Select_Active_File
/FILE_NAME=::TAG_NAMES
;

Metric_Compute_Temporal_Distance
/GLOBAL_RESULT_METRIC_FOLDER=GLOBAL_RESULT_METRIC_FOLDER_&::TAG_NAMES
! /CALCULATE_PER_FILE=FALSE
! /CALCULATE_PER_ALL_CMO_GLOBALS=FALSE
! /CREATE_ALL_INSTANCES=FALSE
! /RIGHT_FOOT_LOCATION=KINETIC_KINEMATIC::RFT::ProxEndPos
! /LEFT_FOOT_LOCATION=KINETIC_KINEMATIC::LFT::ProxEndPos
! /HEIGHT=METRIC::PROCESSED::HEIGHT
/RHS_EVENT=RON
/LHS_EVENT=LON
/RTO_EVENT=ROFF
/LTO_EVENT=LOFF
/STRICT_EVENT_SEQUENCE_VALIDATION=TRUE
! /INCLUDE_EVENTS=
! /EXCLUDE_EVENTS=
! /EVENT_INSTANCE=0
! /COMPUTE_SPEED=TRUE
! /COMPUTE_STATURES_PER_SECOND=TRUE
! /COMPUTE_STRIDE_WIDTH=TRUE
! /COMPUTE_STRIDE_LENGTH=TRUE
! /COMPUTE_CYCLE_TIME=TRUE
! /COMPUTE_STEP_LENGTH=TRUE
! /COMPUTE_STEP_TIME=TRUE
! /COMPUTE_STANCE_TIME=TRUE
! /COMPUTE_SWING_TIME=TRUE
! /COMPUTE_STEPS_PER_MINUTE=TRUE
! /COMPUTE_STRIDES_PER_MINUTE=TRUE
! /COMPUTE_DOUBLE_LIMB_SUPPORT_TIME=FALSE
! /COMPUTE_RIGHT_INITIAL_DOUBLE_LIMB_SUPPORT_TIME=FALSE
! /COMPUTE_RIGHT_TERMINAL_DOUBLE_LIMB_SUPPORT_TIME=TRUE
/TREADMILL_SPEED=2.5
! /LEFT_TREADMILL_SPEED=
/TREADMILL_DIRECTION=UNIT_VECTOR(1,0,0)
;

End_For_Each
/Iteration_Parameter_Name=TAG_NAMES
;

File_Save_As
/FILE_NAME=::FOLDER&RBDS001.cmo
;

Exit_Workspace
;