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Series GSE283496 Query DataSets for GSE283496
Status Public on Mar 19, 2025
Title Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression [scRNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary This study develops engineered glioblastoma organoids (eGBOs) to investigate the role of specific mutations in tumor progression. The analytic framework spans single-cell analysis, spatial transcriptomics, single-cell trajectory analysis, orthotopic implantation, clinically oriented imaging, and histopathological analysis. The work provides an important proof of concept that engineered tumor organoids can model glioblastoma progression.
 
Overall design Single-cell transcriptomes from wildtype (WT) and genetically engineered brain organoids harboring glioblastoma-associated mutations (PRO - TERTp C228T / TP53 R248Q; MES - TERTp C228T / NF1 deletion / PTEN deletion). Organoids were assessed 1 month after in vitro differentiation and 3 months after orthotopic xenotransplantation.
 
Contributor(s) Ishahak M, Kim AH, Millman JR
Citation(s)
  • Ishahak M, Han RH, Annamalai D, Woodiwiss T et al. Genetically Engineered Brain Organoids Recapitulate Spatial and Developmental States of Glioblastoma Progression. Adv Sci (Weinh) 2025 Mar;12(10):e2410110. PMID: 39836549
Submission date Dec 04, 2024
Last update date Mar 20, 2025
Contact name Jeffrey Robert Millman
E-mail(s) jmillman@wustl.edu
Organization name Washington University in St. Louis
Lab Jeffrey Millman
Street address 660 South Euclid
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM8663997 Hashed_eGBOs_1mo
GSM8663998 Txp3mo_WT_eGBO
GSM8663999 Txp3mo_PRO_eGBO
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Relations
BioProject PRJNA1194110

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