Datasets:
Melissa Higa
Melissa-Higa/
T-Cell-Lymphoma-UV
0
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[95ced1]: / MTCL_all_mutations_final.csv

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# Study Disease SampleID UniqueID Chr Start End Ref Alt Gene
1 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 984971 984971 G A AGRN
2 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 1902129 1902129 G A CFAP74
3 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 3328358 3328358 T C PRDM16
4 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 3496479 3496479 T C MEGF6
5 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 6635231 6635231 A G TAS1R1
6 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 12907350 12907350 C T HNRNPCL1,HNRNPCL3,HNRNPCL4
7 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 14107360 14107360 T A PRDM2
8 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 14108873 14108873 A G PRDM2
9 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 16096934 16096934 C T FBLIM1
10 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 19181015 19181015 G C TAS1R2
11 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 19181393 19181393 T C TAS1R2
12 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 20671961 20671961 G A VWA5B1
13 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 21009181 21009181 C A KIF17
14 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 23385641 23385641 A G KDM1A
15 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 29475394 29475394 C G SRSF4
16 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 29475648 29475648 T G SRSF4
17 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 32092525 32092525 A G HCRTR1
18 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 35227362 35227362 C G GJB4
19 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 41485902 41485902 C G SLFNL1
20 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 47138819 47138819 T G TEX38
21 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 47139103 47139103 C T TEX38
22 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 53676448 53676448 G A CPT2
23 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 62672519 62672520 TA T L1TD1
24 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 76397972 76397972 C T ASB17
25 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 86578276 86578276 C T COL24A1
26 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 89579941 89579941 T C GBP2
27 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 89655990 89655990 G C GBP4
28 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 92647223 92647223 A G KIAA1107
29 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 109143294 109143294 G A FAM102B
30 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 144854581 144854581 T C PDE4DIP
31 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 151735576 151735576 T C MRPL9
32 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 152749008 152749008 C CCAGCTCTGGGGGCTGCTG LCE1F
33 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 159175527 159175527 G A ACKR1
34 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 161167918 161167918 C T ADAMTS4
35 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 161167919 161167919 C T ADAMTS4
36 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 161697319 161697319 G A FCRLB
37 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 177001708 177001708 C T ASTN1
38 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 180885430 180885430 T C KIAA1614
39 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 184020945 184020945 G A TSEN15
40 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 186056429 186056429 G T HMCN1
41 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 197024913 197024913 T C F13B
42 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 204199614 204199614 C T PLEKHA6
43 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 209605636 209605648 TAGCAGCAGCAGC T MIR205HG
44 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 214820099 214820099 A G CENPF
45 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 216373104 216373104 C T USH2A
46 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 225268343 225268343 A G DNAH14
47 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 225268346 225268346 G A DNAH14
48 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 226125169 226125169 G A LEFTY2
49 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 236907952 236907952 G T ACTN2
50 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 247694949 247694949 G C OR2C3
51 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 248004848 248004848 G C OR11L1
52 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 248129240 248129240 G A OR2AK2
53 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr1 248458676 248458676 T C OR2T12
54 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 31457644 31457645 GC G EHD3
55 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 73491614 73491614 C T FBXO41
56 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 74597369 74597369 G A DCTN1
57 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 97818260 97818262 GGC G ANKRD36
58 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 97818264 97818264 G GTT ANKRD36
59 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 113676189 113676189 T G IL37
60 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 178080622 178080622 G C HNRNPA3
61 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 211179765 211179766 AT A MYL1
62 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 215855445 215855445 T G ABCA12
63 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr2 218937971 218937971 G T RUFY4
64 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 57326053 57326053 A C ASB14
65 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 161214872 161214872 G T OTOL1
66 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 168845803 168845803 G C MECOM
67 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 186338382 186338382 G C AHSG
68 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 195477975 195477975 G A MUC4
69 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 195477976 195477976 C A MUC4
70 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr3 195509974 195509974 A G MUC4
71 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 46930766 46930766 T A GABRA4
72 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 47944119 47944119 A G CNGA1
73 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 77230686 77230686 G A STBD1
74 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 87696601 87696601 C T PTPN13
75 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 123226031 123226031 A G KIAA1109
76 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 144801662 144801662 C G GYPE
77 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 162841777 162841777 C T FSTL5
78 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 170476887 170476887 G T NEK1
79 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr4 187455092 187455092 C T MTNR1A
80 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 9224812 9224812 G A SEMA5A
81 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 67593359 67593359 C T PIK3R1
82 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 122361517 122361517 C T PPIC
83 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 132160991 132160991 G A SHROOM1
84 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 132160992 132160992 G A SHROOM1
85 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 140530227 140530227 C G PCDHB6
86 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr5 176759170 176759170 C T LMAN2
87 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 656922 656922 G A HUS1B
88 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 25862105 25862105 A C SLC17A3
89 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 28554335 28554335 G A ZBED9
90 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 45922941 45922941 G A CLIC5
91 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 46845956 46845956 C T ADGRF5
92 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 65016977 65016979 TGA T EYS
93 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 90455259 90455260 AT A MDN1
94 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 126080337 126080337 C T HEY2
95 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 136599663 136599663 G A BCLAF1
96 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 159084385 159084385 C T SYTL3
97 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr6 162394407 162394407 C T PARK2
98 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr7 1586653 1586653 A AGCC TMEM184A
99 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr7 2977605 2977605 A T CARD11
100 Choi2015 SS CTCL1 Choi2015_SS_CTCL1 chr7 17370434 17370434 C T AHR