|
a |
|
b/README.md |
|
|
1 |
<table><tbody><tr><td><table cellpadding="2" cellspacing="0" width="600"><tbody><tr bgcolor="#cccccc" valign="top"><td colspan="2"><table width="600"><tbody><tr><td><strong class="acc" id="GSE159610"><a href="/geo/query/acc.cgi?acc=GSE159610" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_recenter)">Series GSE159610</a></strong></td> |
|
|
2 |
<td></td> |
|
|
3 |
<td align="right" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_gds)"><a href="/gds/?term=GSE159610[Accession]">Query DataSets for GSE159610</a></td> |
|
|
4 |
</tr></tbody></table></td></tr> |
|
|
5 |
<tr valign="top"><td>Status</td> |
|
|
6 |
<td>Public on Oct 22, 2020</td> |
|
|
7 |
</tr> |
|
|
8 |
<tr valign="top"><td nowrap="">Title</td> |
|
|
9 |
<td style="text-align: justify">Whole blood transcriptomes of patients receiving digital subtraction angiography</td> |
|
|
10 |
</tr> |
|
|
11 |
<tr valign="top"><td nowrap="">Organism</td> |
|
|
12 |
<td><a href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9606" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_organismus)">Homo sapiens</a></td> |
|
|
13 |
</tr> |
|
|
14 |
<tr valign="top"><td nowrap="">Experiment type</td> |
|
|
15 |
<td>Expression profiling by high throughput sequencing<br></td> |
|
|
16 |
</tr> |
|
|
17 |
<tr valign="top"><td nowrap="">Summary</td> |
|
|
18 |
<td style="text-align: justify">Circulating whole blood transcriptomes can detect the presence of unruptured cerebral aneurysms. Pending additional testing in larger cohorts, this could serve as a foundation to develop a simple blood-based test to facilitate screening and early detection of cerebral aneurysms.<br></td> |
|
|
19 |
</tr> |
|
|
20 |
<tr valign="top"><td nowrap=""> </td> |
|
|
21 |
<td></td> |
|
|
22 |
</tr> |
|
|
23 |
<tr valign="top"><td nowrap="">Overall design</td> |
|
|
24 |
<td style="text-align: justify">We subjected RNA from peripheral whole blood of 47 patients undergoing cerebral digital subtraction angiogrpahy to next-generation RNA sequencing.<br></td> |
|
|
25 |
</tr> |
|
|
26 |
<tr valign="top"><td nowrap=""> </td> |
|
|
27 |
<td></td> |
|
|
28 |
</tr> |
|
|
29 |
<tr valign="top"><td>Contributor(s)</td> |
|
|
30 |
<td><a href="/pubmed/?term=Poppenberg KE[Author]">Poppenberg KE</a>, <a href="/pubmed/?term=Tutino VM[Author]">Tutino VM</a></td> |
|
|
31 |
</tr> |
|
|
32 |
<tr valign="top"><td nowrap="">Citation(s)</td> |
|
|
33 |
<td><span class="pubmed_id" id="33156839,34441376"><!--?xml version="1.0" encoding="UTF-8"?--> |
|
|
34 |
<div class="PubmedCitation"><ul><li><span class="authors">Poppenberg KE, Li L, Waqas M, Paliwal N et al. </span><span class="title">Whole blood transcriptome biomarkers of unruptured intracranial aneurysm. </span><span class="source">PLoS One</span> 2020;15(11):e0241838. PMID: <a title="Link to PubMed record" href="https://www.ncbi.nlm.nih.gov/pubmed/33156839">33156839</a></li><li><span class="authors">Tutino VM, Lu Y, Ishii D, Poppenberg KE et al. </span><span class="title">Aberrant Whole Blood Gene Expression in the Lumen of Human Intracranial Aneurysms. </span><span class="source">Diagnostics (Basel)</span> 2021 Aug 10;11(8). PMID: <a title="Link to PubMed record" href="https://www.ncbi.nlm.nih.gov/pubmed/34441376">34441376</a></li></ul></div> |
|
|
35 |
</span></td> |
|
|
36 |
</tr> |
|
|
37 |
|
|
|
38 |
<tr bgcolor="#eeeeee" valign="top"><td>Submission date</td> |
|
|
39 |
<td>Oct 19, 2020</td> |
|
|
40 |
</tr> |
|
|
41 |
<tr bgcolor="#eeeeee" valign="top"><td>Last update date</td> |
|
|
42 |
<td>Aug 31, 2021</td> |
|
|
43 |
</tr> |
|
|
44 |
<tr bgcolor="#eeeeee" valign="top"><td>Contact name</td> |
|
|
45 |
<td>Kerry E Poppenberg</td> |
|
|
46 |
</tr> |
|
|
47 |
<tr bgcolor="#eeeeee" valign="top"><td nowrap="">Organization name</td> |
|
|
48 |
<td style="text-align: justify">University at Buffalo<br></td> |
|
|
49 |
</tr> |
|
|
50 |
<tr bgcolor="#eeeeee" valign="top"><td nowrap="">Street address</td> |
|
|
51 |
<td style="text-align: justify">875 Ellicott St<br></td> |
|
|
52 |
</tr> |
|
|
53 |
<tr bgcolor="#eeeeee" valign="top"><td nowrap="">City</td> |
|
|
54 |
<td style="text-align: justify">BUFFALO</td> |
|
|
55 |
</tr> |
|
|
56 |
<tr bgcolor="#eeeeee" valign="top"><td nowrap="">State/province</td> |
|
|
57 |
<td style="text-align: justify">NY</td> |
|
|
58 |
</tr> |
|
|
59 |
<tr bgcolor="#eeeeee" valign="top"><td nowrap="">ZIP/Postal code</td> |
|
|
60 |
<td style="text-align: justify">14203</td> |
|
|
61 |
</tr> |
|
|
62 |
<tr bgcolor="#eeeeee" valign="top"><td nowrap="">Country</td> |
|
|
63 |
<td style="text-align: justify">USA</td> |
|
|
64 |
</tr> |
|
|
65 |
<tr valign="top"><td nowrap=""> </td> |
|
|
66 |
<td></td> |
|
|
67 |
</tr> |
|
|
68 |
<tr valign="top"><td>Platforms (1)</td> |
|
|
69 |
<td onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_recenter)"><table cellpadding="3" style="position:relative;top:-5px;left:-5px"><tbody><tr><td valign="top"><a href="/geo/query/acc.cgi?acc=GPL16791" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_recenter)">GPL16791</a></td> |
|
|
70 |
<td valign="top">Illumina HiSeq 2500 (Homo sapiens)</td> |
|
|
71 |
</tr></tbody></table></td> |
|
|
72 |
</tr> |
|
|
73 |
</tbody></table> |