<table><tbody><tr><td><table cellpadding="2" cellspacing="0" width="600"><tbody><tr bgcolor="#cccccc" valign="top"><td colspan="2"><table width="600"><tbody><tr><td><strong class="acc" id="GSE267914"><a href="/geo/query/acc.cgi?acc=GSE267914" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_recenter)">Series GSE267914</a></strong></td>

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<td align="right" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_gds)"><a href="/gds/?term=GSE267914[Accession]">Query DataSets for GSE267914</a></td>

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<tr valign="top"><td>Status</td>

<td>Public on Apr 09, 2025</td>

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<tr valign="top"><td nowrap="">Title</td>

<td style="text-align: justify">Estrogen Intracellular Retention is Augmented by GRAM Domain Containing Protein ASTER-B in Breast Cancer Cells</td>

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<tr valign="top"><td nowrap="">Organism</td>

<td><a href="/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=9606" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_organismus)">Homo sapiens</a></td>

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<tr valign="top"><td nowrap="">Experiment type</td>

<td>Expression profiling by high throughput sequencing<br></td>

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<tr valign="top"><td nowrap="">Summary</td>

<td style="text-align: justify">Estrogen is the primary mitogen for ER+ BC cells, but how the hormone is retained intracellularly is poorly understood. We found that the ER+ BC cell line MCF-7 retains a substantial amount of hormone even upon removal of the hormone from the culture medium. The effect of acute E2 treatment followed by washout on gene regulation was determined by RNA-seq over an E2 treatment timecourse. In agreement with intracellular hormone levels, gene exprssion was also sustained over hours after removal of the hormone. We next identified that ASTER-B, a cholesterol-binding protein, was mislocalized into the nucleus of MCF-7 cells, and was associated with retained E2. By knocking down GRAMD1B (ASTER-B), both E2 retention and its associated gene regulatory programs (ER binding and gene expression) were significantly abrogated. Taken together, this shows E2 retention is required for sustained E2 induction, and that ASTER-B supports accumulation and retention of intracellular E2.<br></td>

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<tr valign="top"><td nowrap="">&nbsp;</td>

<td></td>

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<tr valign="top"><td nowrap="">Overall design</td>

<td style="text-align: justify">RNA-seq of MCF-7 cells treated either continuously or acutely with a time course of E2 treatments.<br></td>

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<tr valign="top"><td nowrap="">&nbsp;</td>

<td></td>

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<tr valign="top"><td>Contributor(s)</td>

<td><a href="/pubmed/?term=Hyung Bum K[Author]">Hyung Bum K</a>, <a href="/pubmed/?term=Tulip N[Author]">Tulip N</a>, <a href="/pubmed/?term=Anusha N[Author]">Anusha N</a>, <a href="/pubmed/?term=W Lee K[Author]">W Lee K</a></td>

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<tr valign="top"><td nowrap="">Citation(s)</td>

<td><span class="pubmed_id" id="39804053"><!--?xml version="1.0" encoding="UTF-8"?-->

<div class="PubmedCitation"><ul><li><span class="authors">Kim HB, Kraus WL. </span><span class="title">Intracellular Retention of Estradiol Is Mediated by GRAM Domain-Containing Protein ASTER-B in Breast Cancer Cells. </span><span class="source">Mol Cancer Res</span> 2025 Apr 1;23(4):313-326. PMID:&nbsp;<a title="Link to PubMed record" href="https://www.ncbi.nlm.nih.gov/pubmed/39804053">39804053</a></li></ul></div>

</span></td>

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<tr valign="top"><td colspan="2"><span id="geo2r"></span> <span id="rnaseq_counts"></span></td></tr>

<tr bgcolor="#eeeeee" valign="top"><td>Submission date</td>

<td>May 20, 2024</td>

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<tr bgcolor="#eeeeee" valign="top"><td>Last update date</td>

<td>Apr 09, 2025</td>

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<tr bgcolor="#eeeeee" valign="top"><td>Contact name</td>

<td>W. Lee Kraus</td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">E-mail(s)</td>

<td><a href="mailto:lee.kraus@utsouthwestern.edu">lee.kraus@utsouthwestern.edu</a><br></td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">Organization name</td>

<td style="text-align: justify">UT Southwestern Medical Center<br></td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">Street address</td>

<td style="text-align: justify">5323 Harry Hines Blvd.<br></td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">City</td>

<td style="text-align: justify">Dallas</td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">State/province</td>

<td style="text-align: justify">TX</td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">ZIP/Postal code</td>

<td style="text-align: justify">75390-8511</td>

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<tr bgcolor="#eeeeee" valign="top"><td nowrap="">Country</td>

<td style="text-align: justify">USA</td>

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<tr valign="top"><td nowrap="">&nbsp;</td>

<td></td>

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<tr valign="top"><td>Platforms (1)</td>

<td onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_recenter)"><table cellpadding="3" style="position:relative;top:-5px;left:-5px"><tbody><tr><td valign="top"><a href="/geo/query/acc.cgi?acc=GPL18573" onmouseout="onLinkOut('HelpMessage' , geo_empty_help)" onmouseover="onLinkOver('HelpMessage' , geoaxema_recenter)">GPL18573</a></td>

<td valign="top">Illumina NextSeq 500 (Homo sapiens)</td>

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