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August Prendergast
August-P/
Parkinson-SubstantiaNigra
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[c2c4ff]: / geo2rparkinsonssubstantianigras.csv

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# ID adj.P.Val P.Value t B logFC Gene.symbol Gene.title
1 215812_s_at 0.0151 8.07E-07 6.4336489 5.47099 0.49779133 SLC6A10PB///SLC6A10P///SLC6A8 solute carrier family 6 member 8 pseudogene///solute carrier family 6 member 10, pseudogene///solute carrier family 6 member 8
2 210854_x_at 0.0151 1.36E-06 6.2291664 5.03026 0.50295015 SLC6A8 solute carrier family 6 member 8
3 201658_at 0.0162 2.18E-06 -6.0449628 4.62831 -0.94588508 ARL1 ADP ribosylation factor like GTPase 1
4 219718_at 0.0191 5.76E-06 -5.6700985 3.79722 -0.44865472 FGGY FGGY carbohydrate kinase domain containing
5 213843_x_at 0.0191 6.17E-06 5.643794 3.7383 0.47147782 SLC6A8 solute carrier family 6 member 8
6 221806_s_at 0.0191 6.70E-06 5.6121248 3.66726 0.99086124 SETD5 SET domain containing 5
7 200601_at 0.0191 6.79E-06 5.6073485 3.65654 0.79260973 ACTN4 actinin alpha 4
8 204275_at 0.0191 7.01E-06 5.59513 3.6291 0.31803658 CAPN15 calpain 15
9 34406_at 0.0191 7.70E-06 5.5588167 3.54746 1.06540169 PACS2 phosphofurin acidic cluster sorting protein 2
10 38671_at 0.0197 8.85E-06 5.5059726 3.42842 0.62540687 PLXND1 plexin D1
11 40837_at 0.0204 1.01E-05 5.4558272 3.31521 0.50779756 TLE2 transducin like enhancer of split 2
12 34206_at 0.0268 1.44E-05 5.3198086 3.00701 0.35865461 ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
13 214096_s_at 0.0317 1.85E-05 5.2251013 2.79151 0.5014983 SHMT2 serine hydroxymethyltransferase 2
14 212778_at 0.0325 2.09E-05 5.1793613 2.6872 1.13146981 PACS2 phosphofurin acidic cluster sorting protein 2
15 212359_s_at 0.0325 2.20E-05 5.1598512 2.64266 0.49657219 ZSWIM8 zinc finger SWIM-type containing 8
16 203206_at 0.0325 2.34E-05 5.1364497 2.58921 0.35446453 FAM53B family with sequence similarity 53 member B
17 213752_at 0.051 4.13E-05 4.9209207 2.09538 0.57973401 KAZN kazrin, periplakin interacting protein
18 204328_at 0.051 4.20E-05 4.9139048 2.07927 0.56988265 TMC6 transmembrane channel like 6
19 219114_at 0.051 4.53E-05 -4.8858001 2.0147 -0.44164038 C3orf18 chromosome 3 open reading frame 18
20 202332_at 0.051 4.58E-05 4.8813648 2.0045 0.69977541 LOC400927-CSNK1E///CSNK1E LOC400927-CSNK1E readthrough///casein kinase 1 epsilon
21 218425_at 0.0525 4.97E-05 4.8504946 1.93354 0.53292112 RNF216 ring finger protein 216
22 205546_s_at 0.0525 5.30E-05 4.8261246 1.87749 0.48556152 TYK2 tyrosine kinase 2
23 214797_s_at 0.0525 5.46E-05 4.8145822 1.85094 1.00844301 CDK18 cyclin dependent kinase 18
24 221640_s_at 0.0525 5.85E-05 4.7885643 1.79108 0.41514112 PIDD1 p53-induced death domain protein 1
25 220142_at 0.0525 5.89E-05 4.7858791 1.7849 0.66814207 HAPLN2 hyaluronan and proteoglycan link protein 2
26 206017_at 0.0525 6.12E-05 -4.7716688 1.75219 -0.56262423 KIAA0319 KIAA0319
27 218714_at 0.0538 6.51E-05 4.7481145 1.69797 0.61755334 PRR14 proline rich 14
28 41160_at 0.0548 6.89E-05 4.7269869 1.64932 0.53425773 MBD3 methyl-CpG binding domain protein 3
29 564_at 0.0559 7.63E-05 4.688195 1.55998 0.6829721 GNA11 G protein subunit alpha 11
30 205883_at 0.0559 7.99E-05 4.6710001 1.52037 1.14434536 ZBTB16 zinc finger and BTB domain containing 16
31 32094_at 0.0559 8.16E-05 4.6627919 1.50146 0.42275055 CHST3 carbohydrate sulfotransferase 3
32 213089_at 0.0559 8.37E-05 4.653403 1.47982 1.64682064 LOC100272216 uncharacterized LOC100272216
33 212772_s_at 0.0559 8.56E-05 4.6449 1.46023 0.96587535 ABCA2 ATP binding cassette subfamily A member 2
34 220525_s_at 0.0559 8.81E-05 4.633706 1.43444 0.67393539 AUP1 ancient ubiquitous protein 1
35 212593_s_at 0.0559 8.91E-05 -4.6296262 1.42504 -0.51807354 MIR4680///PDCD4 microRNA 4680///programmed cell death 4 (neoplastic transformation inhibitor)
36 208715_at 0.0559 9.03E-05 -4.6245085 1.41325 -0.48439598 TMCO1 transmembrane and coiled-coil domains 1
37 206058_at 0.0567 9.41E-05 4.6086997 1.37682 0.53992078 SLC6A12 solute carrier family 6 member 12
38 213876_x_at 0.0567 9.67E-05 4.5986795 1.35373 0.42416459 ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2
39 214369_s_at 0.0699 1.24E-04 4.5036308 1.1347 0.28026336 RASGRP2 RAS guanyl releasing protein 2
40 209507_at 0.0699 1.29E-04 -4.4904082 1.10423 -0.40544652 RPA3 replication protein A3
41 212015_x_at 0.0699 1.32E-04 4.479573 1.07926 0.7549573 MIR4745///PTBP1 microRNA 4745///polypyrimidine tract binding protein 1
42 203773_x_at 0.0699 1.38E-04 -4.463301 1.04177 -0.56802246 BLVRA biliverdin reductase A
43 37278_at 0.0699 1.48E-04 4.4382242 0.98401 0.33950546 TAZ tafazzin
44 41644_at 0.0699 1.50E-04 4.4313391 0.96815 0.59894689 SASH1 SAM and SH3 domain containing 1
45 204581_at 0.0699 1.51E-04 4.4302796 0.96571 0.60506762 CD22 CD22 molecule
46 214298_x_at 0.0699 1.53E-04 4.4241676 0.95163 0.31469167 6-Sep septin 6
47 37996_s_at 0.0699 1.54E-04 4.4230004 0.94894 0.4665853 DMPK dystrophia myotonica protein kinase
48 204906_at 0.0699 1.54E-04 4.4229653 0.94886 0.78866801 RPS6KA2 ribosomal protein S6 kinase A2
49 202519_at 0.0699 1.55E-04 4.4209107 0.94413 0.71544328 MLXIP MLX interacting protein
50 213832_at 0.0699 1.57E-04 -4.4145375 0.92945 -1.20656277 KCND3 potassium voltage-gated channel subfamily D member 3
51 210051_at 0.0699 1.62E-04 4.4021271 0.90087 0.56300462 RAPGEF3 Rap guanine nucleotide exchange factor 3
52 212516_at 0.0699 1.63E-04 4.4004733 0.89707 0.39029623 ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
53 204158_s_at 0.0709 1.69E-04 4.3878788 0.86807 0.52386055 TCIRG1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3
54 204755_x_at 0.0712 1.73E-04 -4.3791179 0.8479 -0.52915797 HLF HLF, PAR bZIP transcription factor
55 203538_at 0.0721 1.81E-04 -4.3617673 0.80796 -0.8235035 CAMLG calcium modulating ligand
56 219222_at 0.0721 1.81E-04 -4.3603226 0.80463 -0.30194843 RBKS ribokinase
57 214643_x_at 0.0736 1.89E-04 4.3438889 0.76681 0.44316358 BIN1 bridging integrator 1
58 220221_at 0.0736 1.91E-04 4.3396142 0.75698 0.38215053 VPS13D vacuolar protein sorting 13 homolog D
59 38521_at 0.0767 2.06E-04 4.3115119 0.69233 0.29525447 CD22 CD22 molecule
60 213236_at 0.0767 2.06E-04 4.3110854 0.69134 0.70442005 SASH1 SAM and SH3 domain containing 1
61 211729_x_at 0.0782 2.14E-04 -4.2971533 0.6593 -0.56784496 BLVRA biliverdin reductase A
62 203718_at 0.0784 2.19E-04 4.2882509 0.63883 0.5068408 PNPLA6 patatin like phospholipase domain containing 6
63 214744_s_at 0.0784 2.22E-04 -4.2836324 0.62822 -0.43183502 SNORA21///RPL23 small nucleolar RNA, H/ACA box 21///ribosomal protein L23
64 209239_at 0.0784 2.25E-04 4.2778029 0.61481 0.26113512 NFKB1 nuclear factor kappa B subunit 1
65 215645_at 0.0826 2.41E-04 4.2523375 0.55629 0.74592967 FLCN folliculin
66 207435_s_at 0.0833 2.51E-04 4.2372873 0.52172 0.60348333 SRRM2 serine/arginine repetitive matrix 2
67 209342_s_at 0.0833 2.53E-04 4.2342565 0.51475 0.17867291 IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
68 212080_at 0.0833 2.54E-04 4.2320942 0.50979 0.62732825 KMT2A lysine methyltransferase 2A
69 222199_s_at 0.0856 2.66E-04 4.2139251 0.46807 0.36167613 BIN3 bridging integrator 3
70 204433_s_at 0.0856 2.73E-04 4.2045297 0.4465 0.43055692 SPATA2 spermatogenesis associated 2
71 220231_at 0.0856 2.78E-04 -4.1972457 0.42978 -0.23806144 PPP1R17 protein phosphatase 1 regulatory subunit 17
72 209541_at 0.0856 2.80E-04 -4.1954242 0.4256 -0.2746967 IGF1 insulin like growth factor 1
73 206567_s_at 0.0856 2.84E-04 4.1901199 0.41343 0.36968079 PHF20 PHD finger protein 20
74 212152_x_at 0.0856 2.84E-04 4.1894622 0.41192 0.64890419 ARID1A AT-rich interaction domain 1A
75 217164_at 0.0867 2.92E-04 4.1792589 0.38851 0.41995241
76 218274_s_at 0.091 3.12E-04 4.1532162 0.32879 0.43509503 ANKZF1 ankyrin repeat and zinc finger domain containing 1
77 215873_x_at 0.091 3.15E-04 4.1501598 0.32178 0.2408603 ABCC10 ATP binding cassette subfamily C member 10
78 203308_x_at 0.091 3.20E-04 4.1441062 0.30791 0.24162497 HPS1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1
79 200919_at 0.091 3.41E-04 4.1200821 0.25287 0.48571176 PHC2 polyhomeotic homolog 2
80 220730_at 0.091 3.41E-04 4.1199233 0.2525 0.27100938 LOC642533 uncharacterized LOC642533
81 213383_at 0.091 3.44E-04 4.1169747 0.24575 0.46887341 SBF1 SET binding factor 1
82 203652_at 0.091 3.46E-04 4.1148894 0.24098 0.59039607 MAP3K11 mitogen-activated protein kinase kinase kinase 11
83 211031_s_at 0.091 3.53E-04 4.1071837 0.22333 0.77750632 CLIP2 CAP-Gly domain containing linker protein 2
84 218523_at 0.091 3.54E-04 4.1060751 0.22079 0.89248427 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
85 201015_s_at 0.091 3.54E-04 4.1052692 0.21895 0.36318532 JUP junction plakoglobin
86 217866_at 0.091 3.56E-04 4.103661 0.21527 0.49478938 CPSF7 cleavage and polyadenylation specific factor 7
87 78495_at 0.091 3.57E-04 4.1020462 0.21157 0.32584725 ZNF783 zinc finger family member 783
88 204431_at 0.091 3.63E-04 4.0958939 0.19749 0.42674772 TLE2 transducin like enhancer of split 2
89 203514_at 0.091 3.64E-04 4.0954398 0.19645 0.38113304 MAP3K3 mitogen-activated protein kinase kinase kinase 3
90 35685_at 0.0911 3.69E-04 4.0898728 0.18371 0.32476348 RING1 ring finger protein 1
91 214780_s_at 0.0911 3.76E-04 4.0826978 0.1673 0.39105625 MYO9B myosin IXB
92 212019_at 0.0911 3.76E-04 4.0824147 0.16665 0.36497981 RSL1D1 ribosomal L1 domain containing 1
93 214297_at 0.0917 3.83E-04 4.0757575 0.15142 0.6601083 CSPG4 chondroitin sulfate proteoglycan 4
94 203744_at 0.0919 3.93E-04 -4.065981 0.12906 -0.54614369 HMGB3 high mobility group box 3
95 208174_x_at 0.0919 3.97E-04 4.0619568 0.11986 0.46184081 ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2
96 212691_at 0.0919 4.00E-04 4.058932 0.11295 0.26337739 NUP188 nucleoporin 188
97 203921_at 0.0919 4.01E-04 4.0578659 0.11051 0.49465529 CHST2 carbohydrate sulfotransferase 2
98 202245_at 0.0919 4.04E-04 4.0548869 0.1037 0.66060335 LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
99 214870_x_at 0.0927 4.12E-04 4.0472012 0.08614 0.74879825 LOC102724993///LOC101930075///NPIPA8///NPIPA7///NPIPA5///NPIPA2///NPIPA3///PKD1P1///NPIPA1 nuclear pore complex-interacting protein family member A7-like///polycystin-1-like///nuclear pore complex interacting protein family member A8///nuclear pore complex interacting protein family member A7///nuclear pore complex interacting protein family member A5///nuclear pore complex interacting protein family member A2///nuclear pore complex interacting protein family member A3///polycystin 1, transient receptor potential channel interacting pseudogene 1///nuclear pore complex interacting protein family member A1
100 221501_x_at 0.0927 4.16E-04 4.043784 0.07833 0.85844276 LOC101930075///NPIPA8///NPIPA7///NPIPA5///NPIPA2///NPIPA3///PKD1P1///NPIPA1 polycystin-1-like///nuclear pore complex interacting protein family member A8///nuclear pore complex interacting protein family member A7///nuclear pore complex interacting protein family member A5///nuclear pore complex interacting protein family member A2///nuclear pore complex interacting protein family member A3///polycystin 1, transient receptor potential channel interacting pseudogene 1///nuclear pore complex interacting protein family member A1